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Putative Xylella fastidiosa subsp. fastidiosa IVIA5235 RM systems
Ref: Arias-Giraldo,L.F. et al. Phytopathology 110 (5), 969-972 (2020)
REBASE ref # 31193
Complete sequence: 2,537,917 bp
GenBank #: CP047171
REBASE acronym: Xfa5235
Org_num: 44414
All begin D1605_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1230 | DUF45 domain-containing protein | |||
1235 | R | Xfav13ORF1230P (100% identity) | Xfa5235ORF1255P | |
??? | S | S.Xfav13ORF1230P (100% identity) | S2.Xfa5235ORF1255P | |
??? | S | S.Xfa92ORF511P (75% identity) | S1.Xfa5235ORF1255P | |
1255 | M | M.Xfav13ORF1230P (100% identity) | M.Xfa5235ORF1255P | |
1260 | 68 aa hypothetical protein | |||
11040 | SLATT domain-containing protein | |||
11045 | R | Xfav13ORF11050P (100% identity) | Xfa5235ORF11055P | |
11050 | S | S.Xfav13ORF11050P (100% identity) | S.Xfa5235ORF11055P | |
11055 | M | M.Xfav13ORF11050P (100% identity) | M.Xfa5235ORF11055P | |
11060 | DUF1524 domain-containing protein | |||
11060 | DUF1524 domain-containing protein | |||
11065 | R | Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | Xfa5235ORF11080P |
11070 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.Xfa5235ORF11080P |
11075 | 88 aa hypothetical protein | |||
11080 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.Xfa5235ORF11080P |
11085 | LysE family transporter | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
3135 | response regulator | |||
3140 | M | M.Xfav13ORF3100P (100% identity) | M.Xfa5235ORF3140P | |
3145 | R | R1.Xfav13ORF3100P (100% identity) | R1.Xfa5235ORF3140P | |
3150 | R | R2.Xfav13ORF3100P (100% identity) | R2.Xfa5235ORF3140P | |
3155 | uroporphyrinogen decarboxylase | |||
5725 | DNA replication protein DnaD | |||
??? | M | M.Xfav13ORF5610P (100% identity) | M.Xfa5235ORF5730P | |
5735 | Ax21 family protein | |||
7105 | glycoside hydrolase family protein | |||
7110 | M | M.Xfav13ORF7095P (100% identity) | M.Xfa5235ORF7110P | |
7115 | 51 aa hypothetical protein | |||
7180 | low molecular weight phosphotyrosine protein | |||
7185 | M | M.Xfav13ORF7170P (100% identity) | M.Xfa5235ORF7185P | |
7190 | type II toxin-antitoxin system RelE/ParE family | |||
8590 | 135 aa hypothetical protein | |||
8595 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.Xfa5235ORF8595P |
8600 | R | Xfav25ORF3130P (100% identity) | TTCGAA | Xfa5235ORF8595P |
8605 | 69 aa hypothetical protein | |||
8800 | DNA primase | |||
8805 | R | Xfav13ORF8800P (100% identity) | Xfa5235ORF8810P | |
??? | M | M.Xfav13ORF8800P (100% identity) | M.Xfa5235ORF8810P | |
8820 | tryptophan--tRNA ligase | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
4485 | 3-oxoacyl-ACP synthase III | |||
4490 | M | M.Xfav13ORF4440P (100% identity) | M.Xfa5235ORF4490P | |
4495 | 72 aa hypothetical protein | |||
4500 | R | Xfav13ORF4440P (100% identity) | Xfa5235ORF4490P | |
4505 | alpha/beta fold hydrolase |