Escherichia coli G1/2 |
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Putative Escherichia coli G1/2 RM systems
Ref: Jenjaroenpun,P. et al. unpublished
REBASE ref # 31142
Complete sequence: 5,288,297 bp
GenBank #: CP060083
REBASE acronym: EcoG12
Org_num: 44346
All begin H4P46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10055 | 388 aa hypothetical protein | |||
| 10060 | M | M.EcoG8ORF10120P (100% identity) | M.EcoG12ORF10060P | |
| 10065 | S | S.EcoG8ORF10120P (100% identity) | S.EcoG12ORF10060P | |
| 10070 | YecA family protein | |||
| 10075 | cold shock domain-containing protein | |||
| 10080 | R | EcoG8ORF10120P (100% identity) | EcoG12ORF10060P | |
| 10085 | M48 family metallopeptidase | |||
| 21830 | restriction endonuclease | |||
| 21835 | M | M.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | M.EcoG12ORF21835P |
| 21840 | S | S.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | S.EcoG12ORF21835P |
| 21845 | R | SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | EcoG12ORF21835P |
| 21850 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1590 | cell division protein DamX | |||
| 1595 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoG12DamP |
| 1600 | ribulose-phosphate 3-epimerase | |||
| 2215 | DUF2556 family protein | |||
| 2220 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoG12ORF2220P |
| 2225 | DNA-binding transcriptional regulator Fis | |||
| 6910 | DUF1382 family protein | |||
| 6915 | M | M.Sso1099ORF735P (68% identity) | M.EcoG12ORF6925BP | |
| 6920 | IS3-like element IS150 family transposase | |||
| 6925 | M | M.EcoR9ORF13905P (32% identity) | M.EcoG12ORF6925AP | |
| 6930 | regulator | |||
| 7080 | YXWGXW repeat-containing protein | |||
| 7085 | RM | EcoG8ORF7130P (100% identity) | EcoG12ORF7085P | |
| 7090 | S | S.EcoR9ORF14070P (99% identity) | S.EcoG12ORF7085P | |
| 7095 | 46 aa hypothetical protein | |||
| 9745 | phosphohydrolase | |||
| 9750 | M | M.Ecos53DcmP (100% identity) | CCWGG | M.EcoG12DcmP |
| 9755 | V | V.EcostT2DcmP (100% identity) | V.EcoG12DcmP | |
| 9760 | drug/metabolite exporter YedA | |||
| 10455 | antitermination protein | |||
| 10460 | M | M.EcoLR03ORF33110P (100% identity) | M.EcoG12ORF10460P | |
| 10465 | ATP-binding protein | |||
| 12710 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.EcoG12ORF12715P | |
| 12720 | ISNCY family transposase | |||
| 14480 | cell envelope integrity protein TolA | |||
| 14495 | M | M.EcoSCU103ORF10815P (100% identity) | M.EcoG12ORF14495P | |
| 14500 | TrmB family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22925 | IS66 family transposase | |||
| 22930 | R | EcoG8McrCP (100% identity) | EcoG12McrCP | |
| 22935 | R | EcoG8McrBP (100% identity) | EcoG12McrBP | |
| 22940 | IS1 family transposase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8510 | PerC family transcriptional regulator | |||
| 8515 | M | M.EcoG8ORF8555P (100% identity) | GATC | M.EcoG12ORF8515P |
| 8520 | LexA family transcriptional regulator | |||
| 16720 | 3-5 exoribonuclease | |||
| 16725 | M | M.EcoG8ORF16525P (100% identity) | M.EcoG12ORF16725P | |
| 16730 | 78 aa hypothetical protein | |||