Xenorhabdus nematophila SII |
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Putative Xenorhabdus nematophila SII RM systems
Ref: Baiome,B.A. et al. unpublished
REBASE ref # 31191
Complete sequence: 4,275,642 bp
GenBank #: CP060401
REBASE acronym: XneS
Org_num: 44412
All begin H8F46_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1250 | IS630 family transposase | |||
| 1255 | M | M.XneC23ORF16695P (100% identity) | M.XneSORF1255P | |
| 1260 | S | S.XneC23ORF16695P (100% identity) | S.XneSORF1255P | |
| 1265 | R | XneC23ORF16695P (100% identity) | XneSORF1255P | |
| 1270 | IS481 family transposase | |||
| 15160 | glutamine--fructose-6-phosphate transaminase | |||
| 15165 | M | M.XneC23ORF5905P (100% identity) | M.XneSORF15165P | |
| 15170 | S | S.Xne1ORF15490P (100% identity) | S.XneSORF15165P | |
| 15175 | R | Xne1ORF15490P (100% identity) | XneSORF15165P | |
| 15180 | N-acetyltransferase | |||
| 16965 | DUF91 domain-containing protein | |||
| 16970 | M | M.XneC23ORF18400P (100% identity) | M.XneSORF16970BP | |
| 16975 | IS982 family transposase | |||
| 16980 | M | M.XneC23ORF19180P (100% identity) | M.XneSORF16970AP | |
| 16985 | AAA family ATPase | |||
| 16990 | S | S1.Xne1ORF17365P (100% identity) | S1.XneSORF16970P | |
| 16995 | IS982 family transposase | |||
| 17000 | S | S2.Xne1ORF17365P (100% identity) | S2.XneSORF16970P | |
| 17005 | R | Xne1ORF17365P (100% identity) | XneSORF16970P | |
| 17010 | IS256 family transposase | |||
| 18340 | IS982 family transposase | |||
| 18345 | M | M.XneC23ORF13295P (100% identity) | M.XneSORF18345P | |
| 18350 | S | S.Xne1ORF18760P (100% identity) | S.XneSORF18345P | |
| 18355 | R | Xne1ORF18760P (100% identity) | XneSORF18345P | |
| 18360 | tRNA dihydrouridine(20/20a) synthase DusA | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 90 | spermidine/putrescine ABC transporter | |||
| 95 | R | Xdo16ORF691P (82% identity) | XneSORF95P | |
| 100 | IS5 family transposase | |||
| 695 | single-stranded DNA-binding protein | |||
| 700 | M | M.Xne1ORF720P (100% identity) | M.XneSORF700P | |
| 705 | helix-turn-helix domain-containing protein | |||
| 1595 | 62 aa hypothetical protein | |||
| 1600 | M | M.XneC23ORF19300P (100% identity) | M.XneSORF1600P | |
| 1605 | IS481 family transposase | |||
| 1610 | RM | XneC23ORF16605P (100% identity) | XneSORF1600P | |
| 1615 | IS982 family transposase | |||
| 14980 | SPOR domain-containing protein | |||
| 14985 | M | M.Xne1DamP (100% identity) | GATC | M.XneSDamP |
| 14990 | ribulose-phosphate 3-epimerase | |||