Xylella fastidiosa subsp. fastidiosa GV230 |
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Putative Xylella fastidiosa subsp. fastidiosa GV230 RM systems
Ref: Weng,L.-W. et al. unpublished
REBASE ref # 31192
Complete sequence: 2,514,993 bp
GenBank #: CP060159
REBASE acronym: XfaGV230
Org_num: 44413
All begin XFGV230_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1195 | M48 family metallopeptidase | |||
| ??? | R | Xfav13ORF1230P (70% identity) | XfaGV230ORF1220P | |
| ??? | S | S.XfasSLORF1215P (100% identity) | S1.XfaGV230ORF1220P | |
| 1210 | S | S.XfaTORF241P (28% identity) | S2.XfaGV230ORF1220P | |
| 1220 | M | M.Xfav13ORF1230P (100% identity) | M.XfaGV230ORF1220P | |
| 1225 | 68 aa hypothetical protein | |||
| 10755 | 70 aa hypothetical protein | |||
| 10760 | R | Xfav13ORF11050P (100% identity) | XfaGV230ORF10770P | |
| 10765 | S | S.XfasSLORF11075P (100% identity) | S.XfaGV230ORF10770P | |
| 10770 | M | M.XfasSLORF11075P (100% identity) | M.XfaGV230ORF10770P | |
| 10775 | HNH endonuclease | |||
| 10775 | HNH endonuclease | |||
| 10780 | R | XfasSLORF11100P (100% identity) | GATCNNNNNNNTGC | XfaGV230ORF10795P |
| 10785 | S | S.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | S.XfaGV230ORF10795P |
| 10790 | 88 aa hypothetical protein | |||
| 10795 | M | M.Xfav13ORF11075P (100% identity) | GATCNNNNNNNTGC | M.XfaGV230ORF10795P |
| 10800 | LysE family translocator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2955 | response regulator | |||
| 2960 | M | M.XfasSLORF3075P (100% identity) | M.XfaGV230ORF2960P | |
| 2965 | R | XfasSLORF3075P (100% identity) | XfaGV230ORF2960P | |
| 2970 | DUF262 domain-containing protein | |||
| 5405 | 50 aa hypothetical protein | |||
| ??? | M | M.Xfav13ORF5610P (100% identity) | M.XfaGV230ORF5410P | |
| 5415 | Ax21 family protein | |||
| 6845 | lysozyme | |||
| 6850 | M | M.Xfav13ORF7095P (100% identity) | M.XfaGV230ORF6850P | |
| 6855 | 51 aa hypothetical protein | |||
| 6920 | low molecular weight phosphotyrosine protein | |||
| 6925 | M | M.Xfav13ORF7170P (100% identity) | M.XfaGV230ORF6925P | |
| 6930 | type II toxin-antitoxin system RelE/ParE family | |||
| 8315 | 135 aa hypothetical protein | |||
| 8320 | M | M.Xfav25ORF3130P (100% identity) | TTCGAA | M.XfaGV230ORF8320P |
| 8325 | R | Xfav25ORF3130P (100% identity) | TTCGAA | XfaGV230ORF8320P |
| 8335 | type IV pilin protein | |||
| 8525 | 56 aa hypothetical protein | |||
| 8530 | R | Xfav13ORF8800P (100% identity) | XfaGV230ORF8535P | |
| ??? | M | M.Xfav13ORF8800P (100% identity) | M.XfaGV230ORF8535P | |
| 8545 | tryptophan--tRNA ligase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4295 | 3-oxoacyl-ACP synthase III | |||
| 4300 | M | M.Xfav13ORF4440P (100% identity) | M.XfaGV230ORF4300P | |
| 4305 | R | XfaWM11ORF4380P (100% identity) | XfaGV230ORF4300P | |
| 4310 | alpha/beta fold hydrolase | |||