Pseudomonas species B11D7D |
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Putative Pseudomonas species B11D7D RM systems
Ref: Hatmaker,E.A. et al. Microbiol Resour Announc (2020) In press
REBASE ref # 31145
Complete sequence: 5,387,171 bp
GenBank #: CP060008
REBASE acronym: PspD7D
Org_num: 44293
All begin HNQ27_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 15595 | 281 aa hypothetical protein | |||
| 15600 | M | M.PspKHPS1ORF5965P (96% identity) | GCGAYNNNNTTG | M.PspD7DI |
| 15605 | S | S.PaePAC6ORF22535P (87% identity) | GCGAYNNNNTTG | S.PspD7DI |
| 15610 | AAA family ATPase | |||
| 15635 | DEAD/DEAH box helicase | |||
| 15640 | R | Pst875ORF7280P (98% identity) | PspD7DORF15640P | |
| 15645 | tyrosine-type recombinase/integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7480 | 247 aa hypothetical protein | |||
| 7485 | RM | PstST9ORF6125P (86% identity) | CCGCGAG | PspD7DII |
| 7490 | 252 aa hypothetical protein | |||
| 16450 | histidine kinase | |||
| 16455 | V | V.Pba101ORF14115P (89% identity) | V.PspD7DORF16460P | |
| 16460 | M | M.SfrXN051ORF16705P (71% identity) | M.PspD7DORF16460P | |
| 16465 | type II toxin-antitoxin system MqsA family | |||
| 17500 | 82 aa hypothetical protein | |||
| 17505 | M | M.PspM3035ORF9945P (85% identity) | M.PspD7DORF17505P | |
| 17510 | 211 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7460 | R | PaePALA55MrrP (96% identity) | PspD7DMrrP | |
| 7465 | NERD domain-containing protein | |||
| 15605 | restriction endonuclease subunit S | |||
| 15610 | R | PmeNSYSUMcrBP (77% identity) | PspD7DMcrBP | |
| 15615 | R | Sdy11565McrCP (96% identity) | PspD7DMcrCP | |
| 15620 | anti-phage defense ZorAB system ZorA | |||