Escherichia coli O25b:H4-ST131 2019_APHA |
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Putative Escherichia coli O25b:H4-ST131 2019_APHA RM systems
Ref: Duggett,N.A. et al. unpublished
REBASE ref # 31113
| Sequence length: | GenBank #: | |
| Chromosome: | 5,065,981 bp | CP051609 |
| plasmid pAPHA_2019: | 113,351 bp | CP051610 |
REBASE acronym: Eco4ST131
Org_num: 44172
All begin HHM37_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14820 | helix-turn-helix domain-containing protein | |||
| 14825 | M | M.Pre393ORF2750P (100% identity) | M.Eco4ST131ORF14825P | |
| 14830 | S | S.EcotcmA3ORF16550P (100% identity) | S.Eco4ST131ORF14825P | |
| 14835 | RecQ family ATP-dependent DNA helicase | |||
| 14840 | DNA-processing protein DprA | |||
| 14845 | R | EcotcmA3ORF16550P (100% identity) | Eco4ST131ORF14825P | |
| 14850 | IS3-like element ISSen4 family transposase | |||
| 16995 | endoribonuclease SymE | |||
| 17000 | R | EcosS9ORF3165P (100% identity) | RTACNNNNGTG | Eco4ST131ORF17010P |
| 17005 | S | S.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | S.Eco4ST131ORF17010P |
| 17010 | M | M.EcosS9ORF3165P (100% identity) | RTACNNNNGTG | M.Eco4ST131ORF17010P |
| 17015 | restriction endonuclease | |||
| 18860 | ash family protein | |||
| 18865 | S | S.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | S.Eco4ST131ORF18870P |
| 18870 | M | M.EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | M.Eco4ST131ORF18870P |
| 18875 | R | EcosS9ORF4930P (100% identity) | AAAGNNNNGTT | Eco4ST131ORF18870P |
| 18880 | 267 aa hypothetical protein | |||
| plasmid pAPHA_2019 | ||||
| 24715 | IS1 family transposase | |||
| 24720 | R | KpnKPH1ORF27575P (100% identity) | CAAYNNNNNCTGG | Eco4ST131ORF24730P |
| 24725 | S | S.SenBR076ORFFP (100% identity) | CAAYNNNNNCTGG | S.Eco4ST131ORF24730P |
| 24730 | M | M.SenceORFJP (99% identity) | CAAYNNNNNCTGG | M.Eco4ST131ORF24730P |
| 24735 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3405 | drug/metabolite exporter YedA | |||
| 3410 | V | V.SflC32DcmP (74% identity) | V.Eco4ST131DcmP | |
| 3415 | M | M.EcosS9DcmP (100% identity) | CCWGG | M.Eco4ST131DcmP |
| 3420 | phosphohydrolase | |||
| 10515 | DNA-binding transcriptional regulator Fis | |||
| 10520 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.Eco4ST131ORF10520P |
| 10525 | DUF2556 family protein | |||
| 11125 | ribulose-phosphate 3-epimerase | |||
| 11130 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco4ST131DamP |
| 11135 | cell division protein DamX | |||
| 16650 | helix-turn-helix domain-containing protein | |||
| 16655 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco4ST131ORF16655P |
| 16660 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco4ST131ORF16655P |
| 16665 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco4ST131ORF16655P |
| 16670 | McrC family protein | |||
| 22100 | 71 aa hypothetical protein | |||
| 22105 | M | M.KpnYN1ORFGP (89% identity) | M.Eco4ST131ORF22105P | |
| 22110 | helix-turn-helix transcriptional regulator | |||
| 24350 | TrmB family transcriptional regulator | |||
| 24355 | M | M.EcosS9ORF10680P (100% identity) | A | M.Eco4ST131ORF24355P |
| 24370 | DUF3927 family protein | |||
| plasmid pAPHA_2019 | ||||
| 24655 | 73 aa hypothetical protein | |||
| 24660 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco4ST131ORF24660P |
| 24665 | 102 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 16665 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 16670 | R | EcosS9McrCP (100% identity) | Eco4ST131McrCP | |
| 16675 | R | EcosS3McrBP (100% identity) | Eco4ST131McrBP | |
| 16680 | glycosyltransferase family 2 protein | |||