Serratia symbiotica CWBI-2.3 |
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Putative Serratia symbiotica CWBI-2.3 RM systems
Ref: Foray,V. et al. Genome Announc 2 (4), e00767-14 (2014)
REBASE ref # 18113
| Sequence length: | GenBank #: | |
| Chromosome: | 3,351,526 bp | CP050855 |
| plasmid pSsAf2.3-2: | 116,749 bp | CP050857 |
REBASE acronym: Ssy23
Org_num: 13719
All begin SYMBAF_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 305 | type II toxin-antitoxin system Phd/YefM family | |||
| 310 | M | M.Ssy23ORF80006P (96% identity) | M.Ssy23ORF310P | |
| 315 | replication endonuclease | |||
| 325 | 78 aa hypothetical protein | |||
| 330 | M | M.Cfr658ORF23005P (91% identity) | M.Ssy23ORF330P | |
| 335 | 130 aa hypothetical protein | |||
| 1870 | 134 aa hypothetical protein | |||
| 1875 | R | Csp156ORF17730P (84% identity) | Ssy23ORF1880P | |
| 1880 | M | M.SsyISORF13630P (89% identity) | M.Ssy23ORF1880P | |
| 1885 | TIGR03757 family integrating conjugative element | |||
| 1935 | conjugal transfer protein TraG | |||
| 1940 | M | M.SmaE36ORF46620P (97% identity) | CCWGG | M.Ssy23ORF180018P |
| 1945 | 689 aa hypothetical protein | |||
| 2490 | acyltransferase | |||
| 2495 | M | M.Ssy241ORF4290P (99% identity) | M.Ssy23ORF2495P | |
| 2500 | transposase | |||
| 4110 | 147 aa hypothetical protein | |||
| 4115 | M | M.Ssy23ORF9975P (97% identity) | M.Ssy23ORF4115P | |
| 4120 | recombination protein NinG | |||
| 4550 | response regulator | |||
| 4555 | M | M.Ssy241ORF12820P (100% identity) | M.Ssy23ORF4555P | |
| 4560 | acyltransferase | |||
| 4590 | transposase | |||
| 4595 | M | M.Ssy241ORF12820P (100% identity) | M.Ssy23ORF4595P | |
| 4600 | acyltransferase | |||
| 7145 | 3-5 exoribonuclease | |||
| 7150 | M | M.Ssy23ORF50155P (100% identity) | M1.Ssy23ORF7150P | |
| 7155 | M | M.Ssy23ORFAP (100% identity) | M2.Ssy23ORF7150P | |
| 7160 | replication endonuclease | |||
| 7160 | replication endonuclease | |||
| 7165 | M | M.Ssy23ORF50153P (100% identity) | M.Ssy23ORF7165P | |
| 7170 | 114 aa hypothetical protein | |||
| 9050 | (2,3-dihydroxybenzoyl)adenylate synthase | |||
| 9055 | M | M.Ssy241ORF4970P (100% identity) | M.Ssy23ORF20166P | |
| 9060 | GNAT family N-acetyltransferase | |||
| 9970 | 157 aa hypothetical protein | |||
| 9975 | M | M.Ssy23ORF30157P (100% identity) | M.Ssy23ORF9975P | |
| 9980 | 150 aa hypothetical protein | |||
| 10275 | transposase | |||
| 10280 | M | M.Ssy23ORF30095P (100% identity) | CCGCGG | M.Ssy23ORF10280P |
| 10285 | R | Ssy23ORF30095P (100% identity) | CCGCGG | Ssy23ORF10280P |
| 10290 | ATP-binding protein | |||
| 10845 | 197 aa hypothetical protein | |||
| 10850 | M | M.Ssy23ORF80006P (100% identity) | M.Ssy23ORF10850P | |
| 10855 | replication endonuclease | |||
| 10855 | replication endonuclease | |||
| 10860 | M | M2.EbaNIH1ORF15170P (77% identity) | M1.Ssy23ORF10860P | |
| 10865 | M | M.Min3226ORF3358P (95% identity) | M2.Ssy23ORF10860P | |
| 10870 | 130 aa hypothetical protein | |||
| 14940 | ribulose-phosphate 3-epimerase | |||
| 14945 | M | M.Ssy241DamP (100% identity) | GATC | M.Ssy23DamP |
| 14950 | SPOR domain-containing protein | |||
| plasmid pSsAf2.3-2 | ||||
| 17350 | 59 aa hypothetical protein | |||
| 17355 | M | M.SsyISORF16510P (97% identity) | M.Ssy23ORF190072P | |
| 17360 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8015 | 94 aa hypothetical protein | |||
| 8020 | M | M.Ssy23ORF230002P (100% identity) | M.Ssy23ORF8020P | |
| 8025 | R | Ssy241ORF5955P (98% identity) | Ssy23ORF8020P | |
| 8030 | conjugal transfer protein TraD | |||