Bacteroides thetaiotaomicron DSM 2079 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Bacteroides thetaiotaomicron DSM 2079 RM systems
Ref: Schori,C. and Ahrens,C. unpublished
REBASE ref # 31096
Complete sequence: 6,271,157 bp
GenBank #: CP040530
REBASE acronym: Bth2079
Org_num: 44124
All begin FE838_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12580 | DUF262 domain-containing protein | |||
| 12585 | R | Msa17ORFY1P (100% identity) | Bth2079ORF12590P | |
| 12590 | M | M.Msa17ORFY1P (100% identity) | M.Bth2079ORF12590P | |
| 12595 | S | S1.BthVORF4518P (100% identity) | S1.Bth2079ORF12590P | |
| 12600 | S | S4.Bth5482AORF9555P (98% identity) | S2.Bth2079ORF12590P | |
| 12605 | integrase | |||
| 12610 | S | S3.BthVORF4518P (100% identity) | S3.Bth2079ORF12590P | |
| 12615 | S | S4.Bth10582IIP (100% identity) | S4.Bth2079ORF12590P | |
| 12620 | helix-turn-helix domain-containing protein | |||
| 12670 | helix-turn-helix domain-containing protein | |||
| 12675 | R | Msa17ORFB2P (100% identity) | Bth2079ORF12690P | |
| 12680 | 307 aa hypothetical protein | |||
| 12685 | DUF262 domain-containing protein | |||
| 12690 | M | M.Msa17ORFB2P (100% identity) | M.Bth2079ORF12690P | |
| 12695 | cell filamentation protein Fic | |||
| 12700 | S | S4.Bth5482AORF9460P (97% identity) | S2.Bth2079ORF12690P | |
| 12705 | S | S4.Msa17ORFB2P (48% identity) | S3.Bth2079ORF12690P | |
| 12710 | S | S2.Msa17ORFB2P (90% identity) | S4.Bth2079ORF12690P | |
| 12715 | S | S1.Msa17ORFB2P (89% identity) | S5.Bth2079ORF12690P | |
| 12720 | site-specific integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1295 | DGQHR domain-containing protein | |||
| 1300 | M | M.Msa17ORFTP (100% identity) | RGATCY | M.Bth2079ORF1300P |
| 1305 | helix-turn-helix transcriptional regulator | |||
| 9985 | 462 aa hypothetical protein | |||
| 9990 | M | M.Pvu626ORF9540P (100% identity) | M.Bth2079ORF9990P | |
| 9995 | ATP-binding protein | |||
| 9995 | ATP-binding protein | |||
| 10000 | RM | BthI5482ORF9380P (100% identity) | Bth2079ORF10000P | |
| 10005 | M | M.Msa17ORFV1P (100% identity) | M.Bth2079ORF10000P | |
| 10010 | site-specific integrase | |||
| 13140 | 364 aa hypothetical protein | |||
| 13145 | M | PxyORF2592P (96% identity) | M.Bth2079ORF13150P | |
| 13150 | RM | Bth5482AORF15445P (100% identity) | Bth2079ORF13150P | |
| 13155 | ATP-dependent helicase | |||
| 13805 | helix-turn-helix transcriptional regulator | |||
| 13810 | M | M.Msa17ORFGP (100% identity) | M.Bth2079ORF13810P | |
| 13815 | histidine kinase | |||
| 24040 | 55 aa hypothetical protein | |||
| 24045 | RM | Msa17ORFE1P (97% identity) | Bth2079ORF24045P | |
| 24050 | transposase | |||