Escherichia coli RHB02-C19 |
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Putative Escherichia coli RHB02-C19 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,091,098 bp | CP058063 |
| plasmid pRHB02-C19_2: | 269,647 bp | CP058064 |
REBASE acronym: Eco2C19
Org_num: 44070
All begin HVV53_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6420 | M48 family metallopeptidase | |||
| 6425 | R | EcoC1730ORF9820P (100% identity) | Eco2C19ORF6440P | |
| 6430 | YecA family protein | |||
| 6435 | S | S1.EcoC1730ORF9820P (100% identity) | S.Eco2C19ORF6440P | |
| 6440 | M | M.EcoC1730ORF9820P (100% identity) | M.Eco2C19ORF6440P | |
| 6445 | 388 aa hypothetical protein | |||
| 19530 | NADPH-dependent aldehyde reductase Ahr | |||
| 19540 | R | EcoYPE3ORF20380P (100% identity) | Eco2C19ORF19540P | |
| ??? | S | S.EcoC53ORFEP (100% identity) | S.Eco2C19ORF19540P | |
| 19550 | IS3-like element IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6760 | drug/metabolite exporter YedA | |||
| 6765 | V | V.SsoSE61DcmP (100% identity) | V.Eco2C19DcmP | |
| 6770 | M | M.EcoC1730DcmP (100% identity) | CCWGG | M.Eco2C19DcmP |
| 6775 | phosphohydrolase | |||
| 9905 | ribosome-associated translation inhibitor RaiA | |||
| 9910 | M | M.EcoEC180ORF6030P (100% identity) | M.Eco2C19ORF9910P | |
| 9915 | Com family DNA-binding transcriptional | |||
| 10315 | toprim domain-containing protein | |||
| 10320 | R | EcoTIF10ORFCP (100% identity) | Eco2C19ORF10325P | |
| 10325 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco2C19ORF10325P | |
| 10330 | ISL3 family transposase | |||
| 10495 | phage holin, lambda family | |||
| 10500 | M | M.SflLIN17ORF17405P (100% identity) | M.Eco2C19ORF10500P | |
| 10505 | 67 aa hypothetical protein | |||
| 10530 | LexA family transcriptional regulator | |||
| 10535 | M | M.EcoT761ORF20590P (100% identity) | GATC | M.Eco2C19ORF10535P |
| 10540 | PerC family transcriptional regulator | |||
| 12695 | transposase | |||
| 12700 | RM | SflLIN17ORF3140P (100% identity) | Eco2C19ORF12700P | |
| 12705 | DEAD/DEAH box helicase | |||
| 13750 | DNA-binding transcriptional regulator Fis | |||
| 13755 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco2C19ORF13755P |
| 13760 | DUF2556 family protein | |||
| 14390 | ribulose-phosphate 3-epimerase | |||
| 14395 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco2C19DamP |
| 14400 | cell division protein DamX | |||
| 19560 | McrC family protein | |||
| 19565 | R | SflFF17ORF19275P (100% identity) | Eco2C19ORF19565P | |
| 19570 | HNH endonuclease | |||
| 20060 | 67 aa hypothetical protein | |||
| 20065 | M | M.Sso63633ORF22290P (100% identity) | M.Eco2C19ORF20065P | |
| 20070 | phage lysis protein EssD | |||
| 21085 | phage terminase large subunit | |||
| 21090 | M | M.EspP049ORF3912P (100% identity) | M.Eco2C19ORF21090P | |
| 21095 | DUF1804 family protein | |||
| 22005 | ISL3 family transposase | |||
| 22010 | M | M.EcoC1730ORF19935P (100% identity) | M.Eco2C19ORF22010P | |
| 22025 | tellurite resistance TerB family protein | |||
| plasmid pRHB02-C19_2 | ||||
| 25885 | 55 aa hypothetical protein | |||
| 25890 | M | M.YpsF1ORFCP (100% identity) | M.Eco2C19ORF25890P | |
| 25895 | thermonuclease family protein | |||
| 26340 | 48 aa hypothetical protein | |||
| 26345 | M | M.YpsF1ORFBP (100% identity) | M.Eco2C19ORF26345P | |
| 26350 | 202 aa hypothetical protein | |||
| 26500 | DNA-binding protein | |||
| 26505 | M | M.SenBL10ORFDP (100% identity) | M.Eco2C19ORF26505P | |
| 26510 | 284 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19550 | IS3-like element IS3 family transposase | |||
| 19555 | R | SflSTLE4McrBP (17% identity) | Eco2C19McrBP | |
| 19560 | R | EcoYPE3McrCP (100% identity) | Eco2C19McrCP | |
| 19565 | HNH endonuclease | |||