Escherichia coli MOD1-ECOR56 |
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Putative Escherichia coli MOD1-ECOR56 RM systems
Ref: Patel,I.R. et al. Microbiol Resour Announc 7 (14), e01133-18 (2018)
REBASE ref # 28427
Contig set: 4,956,973 bp
GenBank #: QOYP00000000 (NZ_QOYP00000000)
REBASE acronym: EcoR56
Org_num: 44001
All begin DTD88_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10810 | restriction endonuclease | |||
| 10815 | M | M.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | M.EcoR56ORF10815P |
| 10820 | S | S.Ecou021ORF19870P (100% identity) | RTACNNNNGTG | S.EcoR56ORF10815P |
| 10825 | R | Ecou021ORF19870P (100% identity) | RTACNNNNGTG | EcoR56ORF10815P |
| 10830 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24715 | IS3 family transposase | |||
| 24720 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.EcoR56ORF24720P |
| 24725 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.EcoR56ORF24720P |
| 24730 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoR56ORF24720P |
| 24735 | restriction endonuclease | |||
| 11810 | cell division protein DamX | |||
| 11815 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoR56DamP |
| 11820 | ribulose-phosphate 3-epimerase | |||
| 7495 | drug/metabolite exporter YedA | |||
| 7500 | V | V.EcosC25DcmP (100% identity) | V.EcoR56DcmP | |
| 7505 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoR56DcmP |
| 7510 | phosphohydrolase | |||
| 5660 | Fis family transcriptional regulator | |||
| 5665 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoR56ORF5665P |
| 5670 | DUF2556 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24730 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 24735 | R | EcosS9McrCP (100% identity) | EcoR56McrCP | |
| 24740 | R | EcosS3McrBP (99% identity) | EcoR56McrBP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24400 | NinE family protein | |||
| 24405 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoR56ORF24405P |
| 24410 | recombination protein NinB | |||