Escherichia coli MOD1-ECOR54 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli MOD1-ECOR54 RM systems
Ref: Patel,I.R. et al. Microbiol Resour Announc 7 (14), e01133-18 (2018)
REBASE ref # 28427
Contig set: 5,035,502 bp
GenBank #: QOYN00000000 (NZ_QOYN00000000)
REBASE acronym: EcoR54
Org_num: 43999
All begin BEA17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 17835 | DUF262 domain-containing protein | |||
| 17840 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoR54ORF17845P |
| 17845 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.EcoR54ORF17845P |
| 17850 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoR54ORF17845P |
| 17855 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18270 | ribulose-phosphate 3-epimerase | |||
| 18275 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoR54DamP |
| 18280 | cell division protein DamX | |||
| 9225 | Fis family transcriptional regulator | |||
| 9230 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoR54ORF9230P |
| 9235 | DUF2556 domain-containing protein | |||
| 5250 | drug/metabolite exporter YedA | |||
| 5255 | V | V.EcosC25DcmP (100% identity) | V.EcoR54DcmP | |
| 5260 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoR54DcmP |
| 5265 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12640 | DUF4102 domain-containing protein | |||
| 12645 | R | EcoUTI89IP (100% identity) | CACAG | EcoR54ORF12650P |
| 12650 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoR54ORF12650P |
| 12655 | 52 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20465 | NinE family protein | |||
| 20470 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoR54ORF20470P |
| 20475 | recombination protein NinB | |||