Escherichia coli MOD1-ECOR52 |
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Putative Escherichia coli MOD1-ECOR52 RM systems
Ref: Patel,I.R. et al. Microbiol Resour Announc 7 (14), e01133-18 (2018)
REBASE ref # 28427
Contig set: 5,097,032 bp
GenBank #: QOYL00000000 (NZ_QOYL00000000)
REBASE acronym: EcoR52
Org_num: 43997
All begin DTD86_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19600 | endoribonuclease SymE | |||
| 19605 | S | S.EcoUTI89II (100% identity) | GAGNNNNNNNGTCA | S.EcoR52ORF19610P |
| 19610 | M | M.EcoUTI89II (97% identity) | GAGNNNNNNNGTCA | M.EcoR52ORF19610P |
| 19615 | R | EcoUTI89IIP (100% identity) | GAGNNNNNNNGTCA | EcoR52ORF19610P |
| 19620 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24425 | 81 aa hypothetical protein | |||
| 24430 | M | M.EcosS3ORF15775P (100% identity) | M.EcoR52ORF24430P | |
| 24435 | R | EcosS3ORF15775P (100% identity) | EcoR52ORF24430P | |
| 24440 | 527 aa hypothetical protein | |||
| 195 | phosphohydrolase | |||
| 200 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoR52DcmP |
| 205 | V | V.EcosC25DcmP (100% identity) | V.EcoR52DcmP | |
| 210 | drug/metabolite exporter YedA | |||
| 21615 | integrase | |||
| 21620 | M | M1.EcoR60ORF15915P (100% identity) | M1.EcoR52ORF21620P | |
| 21625 | M | M2.EcoR60ORF15915P (100% identity) | M2.EcoR52ORF21620P | |
| 21630 | HNH endonuclease | |||
| 21625 | DNA cytosine methyltransferase | |||
| 21630 | R | EcoR60ORF15925P (100% identity) | EcoR52ORF21630P | |
| 21635 | transposase | |||
| 19845 | PerC family transcriptional regulator | |||
| 19850 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoR52ORF19850P |
| 19855 | LexA family transcriptional regulator | |||
| 13900 | cell division protein DamX | |||
| 13905 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoR52DamP |
| 13910 | ribulose-phosphate 3-epimerase | |||
| 6120 | Fis family transcriptional regulator | |||
| 6125 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoR52ORF6125P |
| 6130 | DUF2556 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24525 | DUF4102 domain-containing protein | |||
| 24530 | R | EcoUTI89IP (100% identity) | CACAG | EcoR52ORF24535P |
| 24535 | M | M.EcoUTI89I (100% identity) | CACAG | M.EcoR52ORF24535P |
| 24540 | 52 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17215 | recombination protein NinB | |||
| 17220 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoR52ORF17220P |
| 17225 | NinE family protein | |||