Escherichia coli MOD1-ECOR40 |
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Putative Escherichia coli MOD1-ECOR40 RM systems
Ref: Patel,I.R. et al. Microbiol Resour Announc 7 (14), e01133-18 (2018)
REBASE ref # 28427
Contig set: 5,201,125 bp
GenBank #: QOXZ00000000 (NZ_QOXZ00000000)
REBASE acronym: EcoR40
Org_num: 43986
All begin A6584_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2145 | 428 aa hypothetical protein | |||
| 2150 | S | S.EcoSP5ORF1945P (100% identity) | GTCANNNNNGTG | S.EcoR40ORF2155P |
| 2155 | M | M.EcoSP5ORF1945P (100% identity) | GTCANNNNNGTG | M.EcoR40ORF2155P |
| 2160 | 128 aa hypothetical protein | |||
| 2385 | endoribonuclease SymE | |||
| 2390 | S | S.EcoSP5ORF2185P (100% identity) | CAAYNNNNNNNNTGAG | S.EcoR40ORF2395P |
| 2395 | M | M.SspS13ORF3945P (100% identity) | CAAYNNNNNNNNTGAG | M.EcoR40ORF2395P |
| 2400 | R | EcosLF82ORF3455P (100% identity) | CAAYNNNNNNNNTGAG | EcoR40ORF2395P |
| 2405 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21380 | 73 aa hypothetical protein | |||
| 21400 | M | M.SsoL4094ORF17545P (100% identity) | A | M.EcoR40ORF21400P |
| 21405 | TrmB family transcriptional regulator | |||
| 2170 | restriction endonuclease | |||
| 2175 | R | EcosB2CORFAP (100% identity) | EcoR40ORF2175P | |
| 2180 | HNH endonuclease | |||
| 22330 | 121 aa hypothetical protein | |||
| 22335 | R | Sso8033ORF3755P (99% identity) | EcoR40ORF22340P | |
| ??? | M | M.SflSTLE1ORF5615P (100% identity) | M.EcoR40ORF22340P | |
| 22345 | 257 aa hypothetical protein | |||
| 19310 | Fis family transcriptional regulator | |||
| 19315 | M | M.EspP079ORF3959P (100% identity) | ATGCAT | M.EcoR40ORF19315P |
| 19320 | DUF2556 domain-containing protein | |||
| 20550 | PerC family transcriptional regulator | |||
| 20555 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoR40ORF20555P |
| 20560 | LexA family transcriptional regulator | |||
| 20590 | 67 aa hypothetical protein | |||
| 20595 | M | M.EcoSP5ORF17940P (100% identity) | M.EcoR40ORF20595P | |
| 20600 | lysis protein S | |||
| 5050 | cell division protein DamX | |||
| 5055 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoR40DamP |
| 5060 | ribulose-phosphate 3-epimerase | |||
| 1820 | EamA family transporter | |||
| 1825 | V | V.SflC32DcmP (74% identity) | V.EcoR40DcmP | |
| 1830 | M | M.EcoSP5DcmP (100% identity) | CCWGG | M.EcoR40DcmP |
| 1835 | phosphohydrolase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2160 | 128 aa hypothetical protein | |||
| 2165 | R | EcoSP5McrCP (100% identity) | EcoR40McrCP | |
| 2170 | R | EcoSP46McrBP (100% identity) | EcoR40McrBP | |
| 2175 | HNH endonuclease | |||
| 2370 | 26 aa hypothetical protein | |||
| ??? | R | EcoR41GmrSDP (100% identity) | EcoR40GmrSDP | |
| 2385 | endoribonuclease SymE | |||