Escherichia coli MOD1-ECOR12 |
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Putative Escherichia coli MOD1-ECOR12 RM systems
Ref: Patel,I.R. et al. Microbiol Resour Announc 7 (14), e01133-18 (2018)
REBASE ref # 28427
Contig set: 5,078,970 bp
GenBank #: QOWX00000000 (NZ_QOWX00000000)
REBASE acronym: EcoR12
Org_num: 1235
All begin APT13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20760 | DNA-binding protein | |||
| 20765 | M | M.EcoS19651ORF13565P (100% identity) | M.EcoR12ORF20765P | |
| 20770 | S | S.EcoS19651ORF13565P (100% identity) | S.EcoR12ORF20765P | |
| 20775 | R | EcoS19651ORF13565P (100% identity) | EcoR12ORF20765P | |
| 20780 | lactate utilization protein C | |||
| 12880 | endoribonuclease SymE | |||
| 12885 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.EcoR12I |
| 12890 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.EcoR12IP |
| 12895 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | EcoR12IP |
| 12900 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25410 | cell envelope integrity protein TolA | |||
| 25425 | M | M.EcoSTEC032ORF10825P (100% identity) | M.EcoR12ORF25425P | |
| 25430 | TrmB family transcriptional regulator | |||
| 8095 | phosphohydrolase | |||
| 8100 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.EcoR12DcmP |
| 8105 | V | V.SsoSE61DcmP (100% identity) | V.EcoR12DcmP | |
| 8110 | drug/metabolite exporter YedA | |||
| 19160 | LexA family transcriptional regulator | |||
| 19165 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoR12ORF19165P |
| 19170 | PerC family transcriptional regulator | |||
| 17610 | DUF1382 family protein | |||
| 17615 | M | M.EcoSTEC1080ORF7640P (100% identity) | GATC | M.EcoR12ORF17615P |
| 17620 | regulator | |||
| 17770 | type I toxin-antitoxin system hok family toxin | |||
| 17775 | RM | EcoSO40ORF8270P (100% identity) | EcoR12ORF17775P | |
| 17780 | S | S.EcoR9ORF14070P (100% identity) | S.EcoR12ORF17775P | |
| 17785 | DUF1737 domain-containing protein | |||
| 10205 | protein DamX | |||
| 10210 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoR12DamP |
| 10215 | ribulose-phosphate 3-epimerase | |||
| 15725 | DUF4102 domain-containing protein | |||
| 15730 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoR12ORF15730P |
| 15735 | DUF2556 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18950 | isocitrate dehydrogenase | |||
| 18955 | R | SsoSE61ORF22640P (99% identity) | YCGR | EcoR12McrAP |
| 18960 | DNA-invertase | |||
| 12870 | R | SenHNK130McrCP (100% identity) | EcoR12McrCP | |
| 12875 | R | SenHNK130McrBP (100% identity) | EcoR12McrBP | |
| 12880 | endoribonuclease SymE | |||
| 12895 | type I restriction-modification system | |||
| 12900 | R | Ssp28760MrrP (100% identity) | EcoR12MrrP | |
| 12905 | GTPase | |||