Salmonella enterica CFSAN071978 |
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Putative Salmonella enterica CFSAN071978 RM systems
Ref: Lomonaco,S. unpublished
REBASE ref # 31050
Contig set: 5,008,977 bp
GenBank #: QUVD00000000 (NZ_QUVD00000000)
REBASE acronym: Sen71978
Org_num: 43944
All begin CV985_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2825 | toll/interleukin-1 receptor domain-containing | |||
| 2830 | M | M1.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M1.Sen71978ORF2830P |
| 2835 | M | M2.SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | M2.Sen71978ORF2830P |
| 2840 | S | S.SenSA4ORF5001P (100% identity) | CCCNNNNNRTAG | S.Sen71978ORF2830P |
| 2845 | R | SenSA5ORF17266P (100% identity) | CCCNNNNNRTAG | Sen71978ORF2830P |
| 2850 | Fic family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 25610 | 97 aa hypothetical protein | |||
| 25615 | M | M.SenSA2ORF2906P (92% identity) | CAGCTG | M.Sen71978ORF25615P |
| 25620 | DUF87 domain-containing protein | |||
| 24175 | DUF2556 domain-containing protein | |||
| 24180 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen71978ORF24180P |
| 24185 | Fis family transcriptional regulator | |||
| 25420 | cell division protein DamX | |||
| 25425 | M | M.StyTDamP (100% identity) | GATC | M.Sen71978DamP |
| 25430 | ribulose-phosphate 3-epimerase | |||
| 2855 | FosA7 family fosfomycin resistance glutathione | |||
| 2860 | R | SenS12VPHORF11355P (100% identity) | Sen71978ORF2860P | |
| 2865 | 69 aa hypothetical protein | |||
| 20235 | DNA-binding protein | |||
| 20240 | M | M.Sens770ORF22135P (100% identity) | M.Sen71978ORF20240P | |
| 20245 | 273 aa hypothetical protein | |||
| 23600 | 56 aa hypothetical protein | |||
| ??? | M | M.Sens770ORF21675P (100% identity) | M.Sen71978ORF23605P | |
| 23610 | thermonuclease family protein | |||
| 22010 | TraR/DksA family transcriptional regulator | |||
| 22015 | M | M.SenS0722ORF17610P (100% identity) | GATC | M.Sen71978ORF22015P |
| 22020 | replication endonuclease | |||
| 19885 | replication endonuclease | |||
| 19890 | M | M.SspS13ORF1655P (100% identity) | M.Sen71978ORF19890P | |
| 19895 | R | SspS13ORF1655P (100% identity) | Sen71978ORF19890P | |
| 19900 | DUF262 domain-containing protein | |||
| 2730 | drug/metabolite exporter YedA | |||
| 2735 | V | V.StyUK1DcmP (100% identity) | V.Sen71978DcmP | |
| 2740 | M | M.SenSA5DcmP (100% identity) | CCWGG | M.Sen71978DcmP |
| 2745 | phosphohydrolase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12055 | 33 aa hypothetical protein | |||
| 12060 | R | SenS12VPHORF9140P (100% identity) | CAGAG | Sen71978ORF12065P |
| 12065 | M | M.StyTORF2507P (100% identity) | CAGAG | M.Sen71978ORF12065P |
| 12070 | MFS transporter | |||