Paenarthrobacter ureafaciens YL1 |
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Putative Paenarthrobacter ureafaciens YL1 RM systems
Ref: Yu,L. et al. Bioprocess Biosyst Eng 43 (8), 1521-1531 (2020)
REBASE ref # 31051
Complete sequence: 4,663,430 bp
GenBank #: CP043010
REBASE acronym: PurYL1
Org_num: 43907
All begin FV140_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 12915 | helix-turn-helix transcriptional regulator | |||
| 12920 | R | PurSD2ORF12850P (100% identity) | PurYL1ORF12930P | |
| 12925 | S | S.PurSD2ORF12850P (93% identity) | S.PurYL1ORF12930P | |
| 12930 | M | M.PurSD2ORF12850P (100% identity) | M.PurYL1ORF12930P | |
| 12935 | recombinase family protein | |||
| 17835 | transposase | |||
| ??? | M | M.PurSD2ORF18030BP (100% identity) | M.PurYL1ORF17845P | |
| 17850 | S | S.PurSD2ORF18030P (100% identity) | S.PurYL1ORF17845P | |
| 17855 | R | PurSD2ORF18030P (100% identity) | PurYL1ORF17845P | |
| 17860 | 815 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 15170 | DEAD/DEAH box helicase | |||
| 15175 | M | M.PurSD2ORF15040P (87% identity) | M.PurYL1ORF15175P | |
| 15180 | MarC family protein | |||
| 15430 | restriction endonuclease subunit S | |||
| 15435 | RM | PurSD2ORF15295P (100% identity) | PurYL1ORF15435P | |
| 15440 | AAA family ATPase | |||
| 17780 | 100 aa hypothetical protein | |||
| 17785 | M | M.PurSD2ORF17985P (100% identity) | M.PurYL1ORF17785P | |
| 17790 | 324 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5535 | DUF5107 domain-containing protein | |||
| 5540 | R | PurSD2McrBP (100% identity) | PurYL1McrBP | |
| 5545 | R | PurSD2McrCP (93% identity) | PurYL1McrCP | |
| 5550 | 78 aa hypothetical protein | |||
| 5870 | 90 aa hypothetical protein | |||
| 5875 | R | AspE8ORF10190P (99% identity) | PurYL1ORF5875P | |
| 5880 | 68 aa hypothetical protein | |||