Escherichia coli 74-2 |
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Putative Escherichia coli 74-2 RM systems
Ref: Lv,H. and Cui,Q. unpublished
REBASE ref # 31044
| Sequence length: | GenBank #: | |
| Chromosome: | 4,743,075 bp | CP050044 |
| plasmid pCD74-2-1: | 112,291 bp | CP050045 |
REBASE acronym: Eco7421
Org_num: 43888
All begin G9P51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3360 | IS21 family transposase | |||
| ??? | M | M.EcoS1720ORFBP (100% identity) | M.Eco7421ORF3365P | |
| 3375 | IS3 family transposase | |||
| 3380 | IS5 family transposase | |||
| 3385 | R | EcosEC71ORF17675P (100% identity) | Eco7421ORF3395P | |
| 3390 | S | S.EcoFLI21ORF16100P (100% identity) | S.Eco7421ORF3395P | |
| 3395 | M | M.EcoFLI21ORF16100P (100% identity) | M.Eco7421ORF3395P | |
| 3400 | GTPase family protein | |||
| 9400 | 380 aa hypothetical protein | |||
| 9405 | M | M.EcoZYB62ORF9405P (100% identity) | M.Eco7421ORF9405P | |
| 9410 | S | S1.EcoZYB62ORF9405P (100% identity) | S.Eco7421ORF9405P | |
| 9415 | YecA family protein | |||
| 9420 | R | EcoZYB62ORF9405P (100% identity) | Eco7421ORF9405P | |
| 9425 | M48 family metallopeptidase | |||
| 19610 | 322 aa hypothetical protein | |||
| 19615 | R | SspS13ORF3945P (56% identity) | Eco7421ORF19620P | |
| 19620 | M | M.EcoI110ORF19925P (99% identity) | M.Eco7421ORF19620P | |
| 19625 | S | S.EcoYPE10ORF21230P (100% identity) | S.Eco7421ORF19620P | |
| 19630 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1680 | cell division protein DamX | |||
| 1685 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco7421DamP |
| 1690 | ribulose-phosphate 3-epimerase | |||
| 2310 | DUF2556 family protein | |||
| 2315 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco7421ORF2315P |
| 2320 | DNA-binding transcriptional regulator Fis | |||
| 9080 | HD domain-containing protein | |||
| 9085 | M | M.SflSTLE3DcmP (100% identity) | CCWGG | M.Eco7421DcmP |
| 9090 | V | V.SflSTLE3DcmP (99% identity) | V.Eco7421DcmP | |
| 9095 | drug/metabolite exporter YedA | |||
| plasmid pCD74-2-1 | ||||
| 22860 | helix-turn-helix transcriptional regulator | |||
| 22865 | R | EcoPSJ29ORF43810P (100% identity) | GCWGC | Eco7421ORF22865P |
| 22870 | IS1 family transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8995 | prepilin-type N-terminal cleavage/methylation | |||
| 9000 | R | Eco04AORF9715P (99% identity) | Eco7421ORF9005P | |
| ??? | M | M.Eco21EVAORFEP (99% identity) | M.Eco7421ORF9005P | |
| 9010 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13180 | isocitrate dehydrogenase | |||
| 13185 | R | EcosEC27McrCP (100% identity) | Eco7421McrCP | |
| 13190 | R | EcoteDMcrBP (100% identity) | Eco7421McrBP | |
| 13195 | tail fiber assembly protein | |||
| 19630 | endoribonuclease SymE | |||
| 19635 | R | EcoSTEC508GmrSDP (55% identity) | Eco7421GmrSP | |
| 19640 | IS1 family transposase | |||
| 19645 | R | SflLIN8GmrSDP (38% identity) | Eco7421GmrDP | |
| 19650 | DUF1127 domain-containing protein | |||