Escherichia coli RHB10-C14 |
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Putative Escherichia coli RHB10-C14 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,890,452 bp | CP055967 |
| plasmid pRHB10-C14_2: | 155,392 bp | CP055968 |
| plasmid pRHB10-C14_3: | 111,276 bp | CP055969 |
| plasmid pRHB10-C14_4: | 20,924 bp | CP055970 |
REBASE acronym: Eco10C14
Org_num: 43630
All begin HVW44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17270 | DUF262 domain-containing protein | |||
| 17275 | M | M.EcoS6400ORFDP (99% identity) | M.Eco10C14ORF17275P | |
| 17280 | S | S.EcoTrh52ORF18120P (100% identity) | S.Eco10C14ORF17275P | |
| 17285 | R | EcoTrh52ORF18120P (100% identity) | Eco10C14ORF17275P | |
| 17290 | 237 aa hypothetical protein | |||
| 17550 | 128 aa hypothetical protein | |||
| 17555 | M | M.SflFF71ORF17365P (100% identity) | M.Eco10C14ORF17555P | |
| 17560 | S | S.EcoTrh52ORF17850P (89% identity) | S.Eco10C14ORF17555P | |
| 17565 | 428 aa hypothetical protein | |||
| 17700 | M48 family metallopeptidase | |||
| 17705 | R | EcoTrh52ORF17690P (100% identity) | Eco10C14ORF17715P | |
| 17710 | S | S.EcoTrh52ORF17690P (100% identity) | S.Eco10C14ORF17715P | |
| 17715 | M | M.EcoTrh52ORF17690P (100% identity) | M.Eco10C14ORF17715P | |
| 17720 | restriction endonuclease subunit S | |||
| plasmid pRHB10-C14_3 | ||||
| 25050 | 62 aa hypothetical protein | |||
| 25055 | R | Eco33C09ORF24585P (100% identity) | Eco10C14ORF25060P | |
| 25060 | M | M.Eco33C09ORF24585P (100% identity) | M.Eco10C14ORF25060P | |
| 25065 | chromosome segregation protein SMC | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6310 | phosphohydrolase | |||
| 6315 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco10C14DcmP |
| 6320 | V | V.SflC32DcmP (74% identity) | V.Eco10C14DcmP | |
| 6325 | drug/metabolite exporter YedA | |||
| 10970 | holin | |||
| 10980 | M | M.EcoC5ORF17820P (100% identity) | M.Eco10C14ORF10980P | |
| 10985 | TrmB family transcriptional regulator | |||
| 13115 | NinE family protein | |||
| 13120 | M | M.EcoTrh52ORF21975P (100% identity) | GATC | M.Eco10C14ORF13120P |
| 13125 | recombination protein NinB | |||
| 15595 | phage lysis protein EssD | |||
| 15600 | M | M.EcoCRE1ORF17835P (100% identity) | M.Eco10C14ORF15600P | |
| 15605 | TrmB family transcriptional regulator | |||
| 17520 | HNH endonuclease | |||
| 17525 | R | EcoTrh52ORF17870P (100% identity) | Eco10C14ORF17525P | |
| 17530 | restriction endonuclease | |||
| 23190 | cell division protein DamX | |||
| 23195 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco10C14DamP |
| 23200 | ribulose-phosphate 3-epimerase | |||
| plasmid pRHB10-C14_2 | ||||
| 24405 | 73 aa hypothetical protein | |||
| 24410 | M | M.Sen4346ORF22715P (99% identity) | M.Eco10C14ORF24410P | |
| 24415 | 103 aa hypothetical protein | |||
| plasmid pRHB10-C14_3 | ||||
| 24745 | 101 aa hypothetical protein | |||
| 24750 | M | M.Eco33C09ORF24280P (100% identity) | M.Eco10C14ORF24750P | |
| 24755 | 73 aa hypothetical protein | |||
| plasmid pRHB10-C14_4 | ||||
| 25155 | 102 aa hypothetical protein | |||
| 25160 | M | M.SenST46ORF25580P (100% identity) | M.Eco10C14ORF25160P | |
| 25165 | 58 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17535 | IS3 family transposase | |||
| 17540 | R | EcoTrh52McrBP (73% identity) | Eco10C14McrBP | |
| 17545 | R | EcoTrh52McrCP (100% identity) | Eco10C14McrCP | |
| 17550 | 128 aa hypothetical protein | |||
| 17690 | GIY-YIG nuclease family protein | |||
| 17695 | R | EcoTrh52MrrP (100% identity) | Eco10C14MrrP | |
| 17700 | M48 family metallopeptidase | |||