Citrobacter species RHBSTW-00848 |
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Putative Citrobacter species RHBSTW-00848 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,087,483 bp | CP055910 |
| plasmid pRHBSTW-00848_2: | 278,989 bp | CP055911 |
| plasmid pRHBSTW-00848_3: | 74,405 bp | CP055912 |
| plasmid pRHBSTW-00848_5: | 15,728 bp | CP055914 |
REBASE acronym: Cfr848
Org_num: 43426
All begin HV296_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8785 | IS1 family transposase | |||
| 8790 | R | EcoCP83ORF15500P (100% identity) | Cfr848ORF8800P | |
| 8795 | S | S.Csp859ORF5410P (100% identity) | S.Cfr848ORF8800P | |
| 8800 | M | M.Csp859ORF5410P (100% identity) | M.Cfr848ORF8800P | |
| 8805 | transposase | |||
| 24680 | 222 aa hypothetical protein | |||
| 24685 | R | Csp859ORF21265AP (100% identity) | Cfr848ORF24705BP | |
| 24690 | IS630-like element ISEc33 family transposase | |||
| 24695 | R | Csp859ORF21265BP (100% identity) | Cfr848ORF24705AP | |
| 24700 | S | S.Csp859ORF21265P (100% identity) | S.Cfr848ORF24705P | |
| 24705 | M | M2.Csp859ORF21265P (100% identity) | M2.Cfr848ORF24705P | |
| 24710 | M | M1.Csp859ORF21265P (100% identity) | M1.Cfr848ORF24705P | |
| 24715 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 795 | phage holin family protein | |||
| 800 | M | M.Csp859ORF23300P (100% identity) | M.Cfr848ORF800P | |
| 805 | 71 aa hypothetical protein | |||
| 840 | RusA family crossover junction | |||
| 845 | M | M1.Csp859ORF23345P (100% identity) | M1.Cfr848ORF845P | |
| 850 | M | M2.Csp859ORF23345P (100% identity) | M2.Cfr848ORF845P | |
| 855 | conserved phage C-terminal domain-containing | |||
| 2035 | 197 aa hypothetical protein | |||
| 2040 | M | M.Csp859ORF24535P (100% identity) | M.Cfr848ORF2040P | |
| 2045 | replication endonuclease | |||
| 2045 | replication endonuclease | |||
| 2050 | M | M1.Csp859ORF24545P (100% identity) | M1.Cfr848ORF2050P | |
| 2055 | 65 aa hypothetical protein | |||
| 2060 | M | M2.Csp859ORF24545P (100% identity) | M2.Cfr848ORF2050P | |
| 2065 | 3-5 exonuclease | |||
| 5130 | cell division protein DamX | |||
| 5135 | M | M.Eco9067DamP (100% identity) | GATC | M.Cfr848DamP |
| 5140 | ribulose-phosphate 3-epimerase | |||
| 5685 | DUF2556 family protein | |||
| 5690 | M | M.Csp859ORF2305P (100% identity) | ATGCAT | M.Cfr848ORF5690P |
| 5695 | site-specific integrase | |||
| 10805 | DUF4222 domain-containing protein | |||
| 10810 | M | M.Csp859ORF7400P (100% identity) | M.Cfr848ORF10810P | |
| 10815 | TraR/DksA family transcriptional regulator | |||
| 13145 | phosphohydrolase | |||
| 13150 | M | M.Csp859ORF9725P (100% identity) | CCWGG | M.Cfr848ORF13150P |
| 13155 | V | V.Csp859ORF9725P (100% identity) | V.Cfr848ORF13150P | |
| 13160 | drug/metabolite exporter YedA | |||
| 18130 | 59 aa hypothetical protein | |||
| 18135 | M | M.Csp859ORF14695P (99% identity) | M.Cfr848ORF18135P | |
| 18140 | 85 aa hypothetical protein | |||
| 22875 | DUF1317 family protein | |||
| ??? | M | M.Csp859ORF19440P (100% identity) | M.Cfr848ORF22880P | |
| 22885 | DUF4060 family protein | |||
| plasmid pRHBSTW-00848_2 | ||||
| 26000 | 76 aa hypothetical protein | |||
| 26005 | M | M.Sen3039ORF24445P (100% identity) | M.Cfr848ORF26005P | |
| 26010 | DNA polymerase III subunit beta | |||
| plasmid pRHBSTW-00848_3 | ||||
| 27330 | 190 aa hypothetical protein | |||
| 27335 | RM | Sma10VA4ORF43590P (100% identity) | GACATC | Cfr848ORF27340P |
| 27340 | M | M.Sma10VA4ORF43590P (100% identity) | GACATC | M.Cfr848ORF27340P |
| 27345 | acetyltransferase | |||
| plasmid pRHBSTW-00848_5 | ||||
| 27970 | recombinase family protein | |||
| 27975 | M | M.Mmo48659ORF380P (100% identity) | M.Cfr848ORF27975P | |
| 27980 | R | PaesPA2ORF33320P (98% identity) | Cfr848ORF27975P | |
| 27985 | 82 aa hypothetical protein | |||