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Putative Escherichia coli RHB03-C08 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 4,483,382 bp | CP058036 |
plasmid pRHB03-C08_2: | 44,007 bp | CP058037 |
REBASE acronym: Eco03C08
Org_num: 43429
All begin HVV60_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
5200 | GTPase family protein | |||
5205 | M | M.EcoNT1F25ORFBP (93% identity) | M.Eco03C08ORF5205P | |
5210 | S | S.Eco41C07ORF5215P (100% identity) | S.Eco03C08ORF5205P | |
5215 | R | Eco819ORF3430P (100% identity) | Eco03C08ORF5205P | |
5220 | transposase domain-containing protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1655 | cell division protein DamX | |||
1660 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco03C08DamP |
1665 | ribulose-phosphate 3-epimerase | |||
2280 | DUF2556 family protein | |||
2285 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco03C08ORF2285P |
2290 | DNA-binding transcriptional regulator Fis | |||
8695 | phosphohydrolase | |||
8700 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco03C08DcmP |
8705 | V | V.SflSTLE1DcmP (100% identity) | V.Eco03C08DcmP | |
8710 | drug/metabolite exporter YedA | |||
18585 | HNH endonuclease | |||
18590 | R | SflSTLE4ORF19250P (48% identity) | Eco03C08ORF18590P | |
18595 | IS1 family transposase | |||
plasmid pRHB03-C08_2 | ||||
21650 | IS1380-like element ISEc9 family transposase | |||
21655 | R | EcoPK6ORF23325BP (100% identity) | CCWGG | R2.Eco03C08ORF21660P |
21660 | M | M.SflSTLE4ORF22820P (100% identity) | CCWGG | M.Eco03C08ORF21660P |
21665 | IS1 family transposase |