Escherichia coli RHB06-C17 |
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Putative Escherichia coli RHB06-C17 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,874,806 bp | CP057987 |
| plasmid pRHB06-C17_2: | 119,308 bp | CP057988 |
| plasmid pRHB06-C17_3: | 63,949 bp | CP057989 |
REBASE acronym: Eco06C17
Org_num: 43437
All begin HVV99_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 480 | DUF3387 domain-containing protein | |||
| 485 | R | SenS530DptFP (100% identity) | Eco06C17DptFP | |
| 490 | DNA phosphorothioation-dependent restriction | |||
| 485 | DNA phosphorothioation-dependent restriction | |||
| 490 | R | SenI222DptGP (100% identity) | Eco06C17DptGP | |
| 495 | DNA phosphorothioation-dependent restriction | |||
| 490 | DNA phosphorothioation-dependent restriction | |||
| 495 | R | Eco06C20DptHP (100% identity) | Eco06C17DptHP | |
| 500 | DUF262 domain-containing protein | |||
| 505 | AAA family ATPase | |||
| 510 | M | M.SenS530DndEP (100% identity) | M.Eco06C17DndEP | |
| 515 | DNA sulfur modification protein DndD | |||
| 510 | DNA sulfur modification protein DndE | |||
| 515 | M | M.SenS530DndDP (100% identity) | M.Eco06C17DndDP | |
| 520 | DNA phosphorothioation system sulfurtransferase | |||
| 515 | DNA sulfur modification protein DndD | |||
| 520 | M | M.Eco06C20DndCP (100% identity) | M.Eco06C17DndCP | |
| 525 | DNA sulfur modification protein DndB | |||
| 520 | DNA phosphorothioation system sulfurtransferase | |||
| 525 | M | M.SenS530DndBP (100% identity) | M.Eco06C17DndBP | |
| 530 | porin family protein | |||
| 1980 | cell division protein DamX | |||
| 1985 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco06C17DamP |
| 1990 | ribulose-phosphate 3-epimerase | |||
| 2535 | DUF2556 family protein | |||
| 2540 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco06C17ORF2540P |
| 2545 | DNA-binding transcriptional regulator Fis | |||
| 5180 | helix-turn-helix transcriptional regulator | |||
| 5185 | R | KpnSB611ORF4590P (100% identity) | GCWGC | Eco06C17ORF5185P |
| 5190 | 536 aa hypothetical protein | |||
| 9495 | phosphohydrolase | |||
| 9500 | M | M.Ecos67DcmP (100% identity) | CCWGG | M.Eco06C17DcmP |
| 9505 | V | V.Ecos195DcmP (100% identity) | V.Eco06C17DcmP | |
| 9510 | drug/metabolite exporter YedA | |||
| 13265 | holin | |||
| 13280 | M | M.Eco45S0C06ORF14065P (100% identity) | M.Eco06C17ORF13280P | |
| 13285 | TrmB family transcriptional regulator | |||
| 15940 | DUF1804 family protein | |||
| 15945 | M | M.Eco06C20ORF15945P (100% identity) | M.Eco06C17ORF15945P | |
| 15950 | phage terminase large subunit | |||
| 16075 | replication endonuclease | |||
| 16080 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco06C17ORF16080P |
| 16085 | TraR/DksA family transcriptional regulator | |||
| 18835 | 321 aa hypothetical protein | |||
| 18840 | R | Sso8033ORF3755P (100% identity) | Eco06C17ORF18845P | |
| 18845 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco06C17ORF18845P | |
| 18850 | 257 aa hypothetical protein | |||
| 20675 | sialate O-acetylesterase | |||
| 20680 | R | EcosB2CORFAP (100% identity) | Eco06C17ORF20680P | |
| 20685 | AAA family ATPase | |||
| plasmid pRHB06-C17_2 | ||||
| 24040 | IS110 family transposase | |||
| 24045 | M | M.Eco06C20ORF24045P (100% identity) | M.Eco06C17ORF24045P | |
| 24050 | 73 aa hypothetical protein | |||
| plasmid pRHB06-C17_3 | ||||
| 24430 | 103 aa hypothetical protein | |||
| 24435 | M | M.Kpn1026ORFJP (100% identity) | M.Eco06C17ORF24435P | |
| 24440 | DUF1380 domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20680 | HNH endonuclease | |||
| 20685 | R | Eco40C03McrBP (100% identity) | Eco06C17McrBP | |
| 20690 | R | EcoWMcrCP (34% identity) | Eco06C17McrCP | |
| 20695 | integrase | |||