Escherichia coli RHB09-C20 |
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Putative Escherichia coli RHB09-C20 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,023,615 bp | CP057932 |
| plasmid pRHB09-C20_2: | 136,645 bp | CP057933 |
REBASE acronym: Eco09C20
Org_num: 43456
All begin HVW33_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12415 | DUF4942 domain-containing protein | |||
| 12420 | M | M.EcoW26ORF3070P (100% identity) | M.Eco09C20ORF12420P | |
| 12425 | S | S.SdyFF10ORF20075P (100% identity) | S.Eco09C20ORF12420P | |
| 12430 | R | SdyFF10ORF20075P (100% identity) | Eco09C20ORF12420P | |
| 12440 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 835 | phosphohydrolase | |||
| 840 | M | M.SflWW1DcmP (100% identity) | CCWGG | M.Eco09C20DcmP |
| 845 | V | V.SsoSE61DcmP (100% identity) | V.Eco09C20DcmP | |
| 850 | drug/metabolite exporter YedA | |||
| 2900 | TrmB family transcriptional regulator | |||
| 2905 | M | M.EspP049ORF1957P (100% identity) | M.Eco09C20ORF2905P | |
| 2910 | 92 aa hypothetical protein | |||
| 7190 | replication endonuclease | |||
| 7195 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco09C20ORF7195P |
| 7200 | TraR/DksA family transcriptional regulator | |||
| 10415 | phage holin, lambda family | |||
| 10420 | M | M.SflLIN17ORF17405P (100% identity) | M.Eco09C20ORF10420P | |
| 10425 | 67 aa hypothetical protein | |||
| 10455 | LexA family transcriptional regulator | |||
| 10460 | M | M.Eco17SOC08ORF21800P (99% identity) | GATC | M.Eco09C20ORF10460P |
| 10465 | PerC family transcriptional regulator | |||
| 17010 | cell division protein DamX | |||
| 17015 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco09C20DamP |
| 17020 | ribulose-phosphate 3-epimerase | |||
| 17565 | DUF2556 family protein | |||
| 17570 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco09C20ORF17570P |
| 17575 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB09-C20_2 | ||||
| 24910 | 73 aa hypothetical protein | |||
| 24915 | M | M.EcoC9121ORF217P (100% identity) | M.Eco09C20ORF24915P | |
| 24920 | 103 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7540 | 66 aa hypothetical protein | |||
| 7545 | M | M.EcoFec101ORF21155P (100% identity) | M.Eco09C20ORF7545P | |
| 7550 | DUF2732 family protein | |||