Escherichia coli RHB09-C24 |
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Putative Escherichia coli RHB09-C24 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,108,746 bp | CP057922 |
| plasmid pRHB09-C24_2: | 146,777 bp | CP057923 |
| plasmid pRHB09-C24_3: | 84,336 bp | CP057924 |
| plasmid pRHB09-C24_4: | 5,569 bp | CP057925 |
REBASE acronym: Eco09C24
Org_num: 43459
All begin HVW37_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1860 | cell division protein DamX | |||
| 1865 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco09C24DamP |
| 1870 | ribulose-phosphate 3-epimerase | |||
| 2375 | DUF2556 family protein | |||
| 2380 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco09C24ORF2380P |
| 2385 | DNA-binding transcriptional regulator Fis | |||
| 5720 | adhesin-like autotransporter YpjA/EhaD | |||
| 5725 | R | Sens24184ORF5380P (100% identity) | C | Eco09C24ORF5725P |
| 5730 | DNA primase | |||
| 9735 | phosphohydrolase | |||
| 9740 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco09C24DcmP |
| 9745 | V | V.SsoSE61DcmP (100% identity) | V.Eco09C24DcmP | |
| 9750 | drug/metabolite exporter YedA | |||
| 14090 | holin | |||
| 14100 | M | M.Eco40C03ORF2345P (100% identity) | M.Eco09C24ORF14100P | |
| 14105 | TrmB family transcriptional regulator | |||
| 15855 | 92 aa hypothetical protein | |||
| 15860 | M | M.EcoW26ORF35400P (100% identity) | M.Eco09C24ORF15860P | |
| 15865 | TrmB family transcriptional regulator | |||
| 21505 | IS3 family transposase | |||
| 21510 | M | M.EcoSE11DndBP (100% identity) | M.Eco09C24DndBP | |
| 21515 | DNA phosphorothioation system sulfurtransferase | |||
| 21510 | DNA sulfur modification protein DndB | |||
| 21515 | M | M.EcoSE11DndCP (100% identity) | M.Eco09C24DndCP | |
| 21520 | DNA sulfur modification protein DndD | |||
| 21515 | DNA phosphorothioation system sulfurtransferase | |||
| 21520 | M | M.EcoMc31DndDP (100% identity) | M.Eco09C24DndDP | |
| 21525 | DNA sulfur modification protein DndE | |||
| 21520 | DNA sulfur modification protein DndD | |||
| 21525 | M | M.EcoSE11DndEP (100% identity) | M.Eco09C24DndEP | |
| 21530 | 206 aa hypothetical protein | |||
| 21535 | restriction endonuclease | |||
| 21540 | R | EcoMc31DptHP (99% identity) | Eco09C24DptHP | |
| 21545 | DNA phosphorothioation-dependent restriction | |||
| 21540 | DNA phosphorothioation-dependent restriction | |||
| 21545 | R | EcoMc31DptGP (100% identity) | Eco09C24DptGP | |
| 21550 | DNA phosphorothioation-dependent restriction | |||
| 21540 | DNA phosphorothioation-dependent restriction | |||
| 21545 | R | EcoMc31DptGP (100% identity) | Eco09C24DptG2P | |
| 21550 | DNA phosphorothioation-dependent restriction | |||
| 21545 | DNA phosphorothioation-dependent restriction | |||
| 21550 | R | EcoSE11DptFP (100% identity) | Eco09C24DptF2P | |
| 21555 | DUF4102 domain-containing protein | |||
| 21545 | DNA phosphorothioation-dependent restriction | |||
| 21550 | R | EcoSE11DptFP (100% identity) | Eco09C24DptFP | |
| 21555 | DUF4102 domain-containing protein | |||
| plasmid pRHB09-C24_2 | ||||
| 25160 | 73 aa hypothetical protein | |||
| 25165 | M | M.EcoC9121ORF217P (100% identity) | M.Eco09C24ORF25165P | |
| 25170 | 103 aa hypothetical protein | |||
| plasmid pRHB09-C24_3 | ||||
| 25350 | 103 aa hypothetical protein | |||
| 25355 | M | M.SspPIBORF23080P (100% identity) | M.Eco09C24ORF25355P | |
| 25360 | 73 aa hypothetical protein | |||
| plasmid pRHB09-C24_4 | ||||
| 25760 | MbeD family mobilization/exclusion protein | |||
| 25765 | M | M.SflFF34ORF24420P (100% identity) | CCNGG | M.Eco09C24ORF25765P |
| 25735 | R | KpnDJORFGP (95% identity) | CCNGG | Eco09C24ORF25765P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21320 | endoribonuclease SymE | |||
| 21325 | R | EcoXH990GmrSDP (100% identity) | Eco09C24GmrSDP | |
| 21330 | DUF1127 domain-containing protein | |||
| 21530 | 206 aa hypothetical protein | |||
| 21535 | R | EcoSE11MrrP (100% identity) | Eco09C24MrrP | |