Escherichia fergusonii RHB10-C04 |
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Putative Escherichia fergusonii RHB10-C04 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,599,592 bp | CP057918 |
| plasmid pRHB10-C04_2: | 114,980 bp | CP057919 |
REBASE acronym: Efe10C04
Org_num: 43481
All begin HVW38_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17820 | Fic family protein | |||
| 17825 | R | EfeEF02ORF206830P (100% identity) | Efe10C04ORF17830P | |
| 17830 | M | M.EfeEF02ORF206830P (100% identity) | M.Efe10C04ORF17830P | |
| 17835 | S | S.EfeEF02ORF206830P (100% identity) | S.Efe10C04ORF17830P | |
| 17840 | endoribonuclease SymE | |||
| 17920 | DUF4942 domain-containing protein | |||
| 17925 | M | M.EfeEF02ORF206740P (100% identity) | M.Efe10C04ORF17925P | |
| 17930 | S | S.Efe42C24ORF17940P (100% identity) | S.Efe10C04ORF17925P | |
| 17935 | R | EfeEF02ORF206740P (100% identity) | Efe10C04ORF17925P | |
| 17945 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 725 | bifunctional isocitrate dehydrogenase | |||
| 730 | M | M.EfeC18ORF680P (100% identity) | M.Efe10C04ORF730P | |
| 735 | glyoxylate bypass operon transcriptional | |||
| 2445 | helix-turn-helix domain-containing protein | |||
| 2450 | M | M.Sen24770ORF310P (100% identity) | GATC | M.Efe10C04ORF2450P |
| 2455 | RusA family crossover junction | |||
| 15910 | DUF1317 family protein | |||
| 15915 | M | M.EfeC13ORF14690P (100% identity) | M.Efe10C04ORF15915P | |
| 15920 | 93 aa hypothetical protein | |||
| 17900 | HNH endonuclease | |||
| 17905 | R | Efe42C24ORF17920P (100% identity) | Efe10C04ORF17905P | |
| 17910 | McrC family protein | |||
| 18580 | DNA-binding transcriptional regulator Fis | |||
| 18585 | M | M.EfeTORF37040P (100% identity) | M.Efe10C04ORF18585P | |
| 18590 | DUF2556 family protein | |||
| 19105 | ribulose-phosphate 3-epimerase | |||
| 19110 | M | M.EfeTDamP (100% identity) | M.Efe10C04DamP | |
| 19115 | cell division protein DamX | |||
| plasmid pRHB10-C04_2 | ||||
| 22290 | 103 aa hypothetical protein | |||
| 22295 | M | M.Efe42C24ORF22300P (100% identity) | SAY | M.Efe10C04ORF22295P |
| 22300 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17840 | endoribonuclease SymE | |||
| 17845 | R | EfeTMcrBP (100% identity) | Efe10C04McrB2P | |
| 17850 | R | EfeMcrCP (100% identity) | Efe10C04McrC2P | |
| 17905 | HNH endonuclease | |||
| 17910 | R | EfeEF02McrC2P (100% identity) | Efe10C04McrCP | |
| 17915 | R | EfeEF02McrB2P (100% identity) | Efe10C04McrBP | |
| 17920 | DUF4942 domain-containing protein | |||