Escherichia fergusonii RHB10-C23 |
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Putative Escherichia fergusonii RHB10-C23 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,599,406 bp | CP057896 |
| plasmid pRHB10-C23_2: | 114,980 bp | CP057897 |
REBASE acronym: Efe10C23
Org_num: 43482
All begin HVW49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17810 | Fic family protein | |||
| 17815 | R | EfeEF02ORF206830P (100% identity) | Efe10C23ORF17820P | |
| 17820 | M | M.EfeEF02ORF206830P (100% identity) | M.Efe10C23ORF17820P | |
| 17825 | S | S.EfeEF02ORF206830P (100% identity) | S.Efe10C23ORF17820P | |
| 17830 | endoribonuclease SymE | |||
| 17910 | DUF4942 domain-containing protein | |||
| 17915 | M | M.EfeEF02ORF206740P (100% identity) | M.Efe10C23ORF17915P | |
| 17920 | S | S.Efe42C24ORF17940P (100% identity) | S.Efe10C23ORF17915P | |
| 17925 | R | EfeEF02ORF206740P (100% identity) | Efe10C23ORF17915P | |
| 17935 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 725 | bifunctional isocitrate dehydrogenase | |||
| 730 | M | M.EfeC18ORF680P (100% identity) | M.Efe10C23ORF730P | |
| 735 | glyoxylate bypass operon transcriptional | |||
| 2445 | helix-turn-helix domain-containing protein | |||
| 2450 | M | M.Sen24770ORF310P (100% identity) | GATC | M.Efe10C23ORF2450P |
| 2455 | RusA family crossover junction | |||
| 15900 | DUF1317 family protein | |||
| 15905 | M | M.EfeC13ORF14690P (100% identity) | M.Efe10C23ORF15905P | |
| 15910 | 93 aa hypothetical protein | |||
| 17890 | HNH endonuclease | |||
| 17895 | R | Efe42C24ORF17920P (100% identity) | Efe10C23ORF17895P | |
| 17900 | McrC family protein | |||
| 18570 | DNA-binding transcriptional regulator Fis | |||
| 18575 | M | M.EfeTORF37040P (100% identity) | M.Efe10C23ORF18575P | |
| 18580 | DUF2556 family protein | |||
| 19095 | ribulose-phosphate 3-epimerase | |||
| 19100 | M | M.EfeTDamP (100% identity) | M.Efe10C23DamP | |
| 19105 | cell division protein DamX | |||
| plasmid pRHB10-C23_2 | ||||
| 22280 | 103 aa hypothetical protein | |||
| 22285 | M | M.Efe42C24ORF22300P (100% identity) | SAY | M.Efe10C23ORF22285P |
| 22290 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 17830 | endoribonuclease SymE | |||
| 17835 | R | EfeTMcrBP (100% identity) | Efe10C23McrB2P | |
| 17840 | R | EfeMcrCP (100% identity) | Efe10C23McrC2P | |
| 17895 | HNH endonuclease | |||
| 17900 | R | EfeEF02McrC2P (100% identity) | Efe10C23McrCP | |
| 17905 | R | EfeEF02McrB2P (100% identity) | Efe10C23McrBP | |
| 17910 | DUF4942 domain-containing protein | |||