Escherichia coli RHB11-C13 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli RHB11-C13 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,755,202 bp
GenBank #: CP057891
REBASE acronym: Eco11C13
Org_num: 43468
All begin HVW54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11420 | 322 aa hypothetical protein | |||
| 11425 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco11C13ORF11430P |
| 11430 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco11C13ORF11430P |
| 11435 | S | S.SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | S.Eco11C13ORF11430P |
| 11440 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 850 | phosphohydrolase | |||
| 855 | M | M.SspS13DcmP (100% identity) | CCWGG | M.Eco11C13DcmP |
| 860 | V | V.EcoSFE8DcmP (100% identity) | V.Eco11C13DcmP | |
| 865 | drug/metabolite exporter YedA | |||
| 2965 | TrmB family transcriptional regulator | |||
| 2970 | M | M.EcoV04ORF12550P (100% identity) | M.Eco11C13ORF2970P | |
| 2975 | 92 aa hypothetical protein | |||
| 6775 | replication endonuclease | |||
| 6780 | M | M.EcoPE15ORF23185P (100% identity) | GATC | M.Eco11C13ORF6780P |
| 6785 | TraR/DksA family transcriptional regulator | |||
| 11630 | HNH endonuclease | |||
| 11635 | R | SflN101ORF11875P (100% identity) | Eco11C13ORF11635P | |
| 11640 | AAA family ATPase | |||
| 16210 | cell division protein DamX | |||
| 16215 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco11C13DamP |
| 16220 | ribulose-phosphate 3-epimerase | |||
| 16740 | DUF2556 family protein | |||
| 16745 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco11C13ORF16745P |
| 16750 | DNA-binding transcriptional regulator Fis | |||
| 19980 | TraR/DksA family transcriptional regulator | |||
| 19985 | M | M.EcoS082ORF32760P (100% identity) | GATC | M.Eco11C13ORF19985P |
| 19990 | replication endonuclease | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11440 | endoribonuclease SymE | |||
| ??? | R | EcoW122GmrDP (100% identity) | Eco11C13GmrDP | |
| 11450 | R | SflN101GmrSP (100% identity) | Eco11C13GmrSP | |
| 11455 | DUF1127 domain-containing protein | |||
| 11635 | HNH endonuclease | |||
| 11640 | R | SflN101McrBP (100% identity) | Eco11C13McrBP | |
| 11645 | R | SflN101McrCP (100% identity) | Eco11C13McrCP | |
| 11650 | 128 aa hypothetical protein | |||