Escherichia coli RHB12-C01 |
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Putative Escherichia coli RHB12-C01 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,826,363 bp | CP057876 |
| plasmid pRHB12-C01_2: | 105,598 bp | CP057877 |
REBASE acronym: Eco12C01
Org_num: 43474
All begin HVW60_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1740 | cell division protein DamX | |||
| 1745 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco12C01DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco12C01ORF2305P |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 13930 | drug/metabolite exporter YedA | |||
| 13935 | V | V.SsoSE61DcmP (100% identity) | V.Eco12C01DcmP | |
| 13940 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco12C01DcmP |
| 13945 | phosphohydrolase | |||
| 20025 | IS3 family transposase | |||
| 20030 | M | M.EcosB7ADndBP (100% identity) | M.Eco12C01DndBP | |
| 20035 | DNA phosphorothioation system sulfurtransferase | |||
| 20030 | DNA sulfur modification protein DndB | |||
| 20035 | M | M.EcosB7ADndCP (99% identity) | M.Eco12C01DndCP | |
| 20040 | DNA sulfur modification protein DndD | |||
| 20035 | DNA phosphorothioation system sulfurtransferase | |||
| 20040 | M | M.EcosB7ADndDP (100% identity) | M.Eco12C01DndDP | |
| 20045 | DNA sulfur modification protein DndE | |||
| 20040 | DNA sulfur modification protein DndD | |||
| 20045 | M | M.EcosB7ADndEP (100% identity) | M.Eco12C01DndEP | |
| 20050 | AAA family ATPase | |||
| 20055 | DUF262 domain-containing protein | |||
| 20060 | R | EcosB7ADptHP (100% identity) | Eco12C01DptHP | |
| 20065 | DNA phosphorothioation-dependent restriction | |||
| 20060 | DNA phosphorothioation-dependent restriction | |||
| 20065 | R | EcosB7ADptGP (100% identity) | Eco12C01DptGP | |
| 20070 | DNA phosphorothioation-dependent restriction | |||
| 20065 | DNA phosphorothioation-dependent restriction | |||
| 20070 | R | EcosB7ADptFP (100% identity) | Eco12C01DptFP | |
| 20075 | tyrosine-type recombinase/integrase | |||
| 20140 | Polarity suppression protein | |||
| 20145 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco12C01ORF20145P |
| 20150 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco12C01ORF20145P |
| 20155 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco12C01ORF20145P |
| 20160 | integrase arm-type DNA-binding domain-containing | |||
| plasmid pRHB12-C01_2 | ||||
| 23545 | 73 aa hypothetical protein | |||
| 23550 | M | M.SflN92ORF24820P (100% identity) | M.Eco12C01ORF23550P | |
| 23555 | 101 aa hypothetical protein | |||