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Putative Escherichia coli RHB14-C20 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 4,508,714 bp | CP057804 |
plasmid pRHB14-C20_2: | 132,986 bp | CP057805 |
REBASE acronym: Eco14C20
Org_num: 43350
All begin HVW96_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
12675 | Fic family protein | |||
12680 | R | Eco14C16ORF12690P (100% identity) | Eco14C20ORF12685P | |
12685 | M | M.Eco14C16ORF12690P (100% identity) | M.Eco14C20ORF12685P | |
12690 | S | S.Eco14C16ORF12690P (100% identity) | S.Eco14C20ORF12685P | |
12695 | endoribonuclease SymE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
3245 | phosphohydrolase | |||
3250 | M | M.Eco14C16DcmP (100% identity) | CCWGG | M.Eco14C20DcmP |
3255 | V | V.Eco14C16DcmP (100% identity) | V.Eco14C20DcmP | |
3260 | drug/metabolite exporter YedA | |||
5250 | DUF1737 domain-containing protein | |||
5255 | M | M.Eco14C16ORF5255P (100% identity) | M.Eco14C20ORF5255P | |
5260 | TrmB family transcriptional regulator | |||
11345 | ferrichrome porin FhuA | |||
11350 | R | Eco14C16ORF11360P (100% identity) | Eco14C20ORF11355P | |
11355 | M | M.Eco14C16ORF11360P (100% identity) | M.Eco14C20ORF11355P | |
11360 | bifunctional glycosyl | |||
12460 | LexA family transcriptional regulator | |||
12465 | M | M.EcoTO6ORF3546P (100% identity) | GATC | M.Eco14C20ORF12465P |
12470 | PerC family transcriptional regulator | |||
13230 | DNA-binding transcriptional regulator Fis | |||
13235 | M | M.Eco14C16ORF13235P (100% identity) | ATGCAT | M.Eco14C20ORF13235P |
13240 | DUF2556 family protein | |||
13760 | ribulose-phosphate 3-epimerase | |||
13765 | M | M.Eru07ADamP (100% identity) | GATC | M.Eco14C20DamP |
13770 | cell division protein DamX | |||
17545 | N-acetyltransferase | |||
17550 | M | M.EcoE69ORF11000P (100% identity) | M.Eco14C20ORF17550P | |
17555 | R | Eco14C16ORF17550P (100% identity) | Eco14C20ORF17550P | |
17565 | transcriptional regulator | |||
18230 | transposase | |||
18235 | R | R1.Eru07AORF15765P (100% identity) | GGWCC | Eco14C20ORF18235P |
18240 | IS256 family transposase | |||
18240 | IS256 family transposase | |||
18245 | M | M.EcoE69ORF11700P (100% identity) | GGNCC | M.Eco14C20ORF18245P |
18250 | R | Eco14C16ORF18245P (100% identity) | GGNCC | Eco14C20ORF18245P |
18255 | transposase | |||
plasmid pRHB14-C20_2 | ||||
21845 | 103 aa hypothetical protein | |||
21850 | M | M.SflFF87ORF23240P (100% identity) | M.Eco14C20ORF21850P | |
21855 | 73 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
12695 | endoribonuclease SymE | |||
12700 | R | Eco14C16GmrSDP (100% identity) | Eco14C20GmrSDP | |
12705 | DUF1127 domain-containing protein |