Escherichia coli RHB14-C21 |
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Putative Escherichia coli RHB14-C21 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,898,273 bp | CP057802 |
| plasmid pRHB14-C21_2: | 48,915 bp | CP057803 |
REBASE acronym: Eco14C21
Org_num: 43351
All begin HVW97_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1675 | cell division protein DamX | |||
| 1680 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco14C21DamP |
| 1685 | ribulose-phosphate 3-epimerase | |||
| 2390 | DUF2556 family protein | |||
| 2395 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco14C21ORF2395P |
| 2400 | tyrosine-type recombinase/integrase | |||
| 5570 | transposase | |||
| 5575 | RM | SflLIN17ORF3140P (100% identity) | Eco14C21ORF5575P | |
| 5580 | DEAD/DEAH box helicase | |||
| 7430 | recombination protein NinB | |||
| 7435 | M | M.Eco14C21ORF16960P (100% identity) | GATC | M.Eco14C21ORF7435P |
| 7440 | phosphoadenosine phosphosulfate reductase family | |||
| 9750 | phosphohydrolase | |||
| 9755 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco14C21DcmP |
| 9760 | V | V.SsoSE61DcmP (100% identity) | V.Eco14C21DcmP | |
| 9765 | drug/metabolite exporter YedA | |||
| 11740 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco14C21ORF11745P | |
| 11750 | 60 aa hypothetical protein | |||
| 15585 | phosphoadenosine phosphosulfate reductase family | |||
| 15590 | M | M.Eco82640ORF37230P (99% identity) | M.Eco14C21ORF15590P | |
| 15595 | TraR/DksA family transcriptional regulator | |||
| 16955 | recombination protein NinB | |||
| 16960 | M | M.Eco14C21ORF7435P (100% identity) | GATC | M.Eco14C21ORF16960P |
| 16965 | phosphoadenosine phosphosulfate reductase family | |||
| 18980 | DUF1317 family protein | |||
| 18985 | M | M.Sbo812ORFAP (100% identity) | M.Eco14C21ORF18985P | |
| 18990 | cell division protein ZapA | |||
| 20740 | RM | Eco47SOC05ORF11800P (100% identity) | Eco14C21ORF20740P | |
| 20745 | DEAD/DEAH box helicase | |||
| 20785 | HNH endonuclease | |||
| 20790 | R | EcoC9101ORF4124P (100% identity) | Eco14C21ORF20790P | |
| 20795 | 678 aa hypothetical protein | |||
| 20990 | osmoprotectant transport activator ProQ | |||
| 20995 | M | M.SflFF24DndBP (100% identity) | M.Eco14C21DndBP | |
| 21000 | DNA phosphorothioation system sulfurtransferase | |||
| 20995 | DNA sulfur modification protein DndB | |||
| 21000 | M | M.SflFF24DndCP (100% identity) | M.Eco14C21DndCP | |
| 21005 | DNA sulfur modification protein DndD | |||
| 21000 | DNA phosphorothioation system sulfurtransferase | |||
| 21005 | M | M.SflFF24DndDP (100% identity) | M.Eco14C21DndDP | |
| 21010 | DNA sulfur modification protein DndE | |||
| 21005 | DNA sulfur modification protein DndD | |||
| 21010 | M | M.SflFF24DndEP (100% identity) | M.Eco14C21DndEP | |
| 21015 | DGQHR domain-containing protein | |||
| 21025 | accessory gene regulator B family protein | |||
| 21030 | R | EcosEC5DptHP (99% identity) | Eco14C21DptHP | |
| 21035 | DNA phosphorothioation-dependent restriction | |||
| 21030 | DNA phosphorothioation-dependent restriction | |||
| 21035 | R | SflFF24DptGP (100% identity) | Eco14C21DptGP | |
| 21040 | DNA phosphorothioation-dependent restriction | |||
| 21035 | DNA phosphorothioation-dependent restriction | |||
| 21040 | R | SflFF24DptFP (100% identity) | Eco14C21DptFP | |
| 21045 | porin family protein | |||
| plasmid pRHB14-C21_2 | ||||
| 24170 | IS200/IS605 family element transposase accessory | |||
| 24175 | M | M.EcoC1737ORF25960P (99% identity) | M.Eco14C21ORF24175P | |
| 24180 | recombination-associated protein RdgC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 13780 | isocitrate dehydrogenase | |||
| 13785 | R | Ecos15955McrCP (100% identity) | Eco14C21McrCP | |
| 13790 | R | Ecos15955McrBP (100% identity) | Eco14C21McrBP | |
| 13795 | tail fiber assembly protein | |||