Escherichia coli RHB19-C10 |
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Putative Escherichia coli RHB19-C10 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,947,897 bp | CP057650 |
| plasmid pRHB19-C10_2: | 60,660 bp | CP057651 |
REBASE acronym: Eco19C10
Org_num: 43289
All begin HVX49_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20460 | 322 aa hypothetical protein | |||
| 20465 | R | Eco19C14ORF20475P (100% identity) | Eco19C10ORF20470P | |
| 20470 | M | M.Ema777ORF2985P (100% identity) | M.Eco19C10ORF20470P | |
| 20475 | S | S.Eco45S0C05ORF19820P (100% identity) | S.Eco19C10ORF20470P | |
| 20480 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1745 | cell division protein DamX | |||
| 1750 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco19C10DamP |
| 1755 | ribulose-phosphate 3-epimerase | |||
| 2345 | DUF2556 family protein | |||
| 2350 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco19C10ORF2350P |
| 2355 | DNA-binding transcriptional regulator Fis | |||
| 4910 | TraR/DksA family transcriptional regulator | |||
| 4915 | M | M.Eco19C14ORF4920P (100% identity) | M.Eco19C10ORF4915P | |
| 4920 | 273 aa hypothetical protein | |||
| 10745 | drug/metabolite exporter YedA | |||
| 10750 | V | V.Eco4221DcmP (74% identity) | V.Eco19C10DcmP | |
| 10755 | M | M.Eco4221DcmP (100% identity) | CCWGG | M.Eco19C10DcmP |
| 10760 | phosphohydrolase | |||
| 18485 | flagellar basal body P-ring formation protein | |||
| 18490 | M | M.Eco6C06ORF19785P (100% identity) | M.Eco19C10ORF18490P | |
| 18495 | R | Eco19C14ORF18495P (100% identity) | Eco19C10ORF18490P | |
| 18500 | flagellar biosynthesis anti-sigma factor FlgM | |||
| 20230 | phage lysis protein EssD | |||
| 20235 | M | M.EcoY18JORF19500P (100% identity) | M.Eco19C10ORF20235P | |
| 20240 | TrmB family transcriptional regulator | |||
| 20275 | LexA family transcriptional regulator | |||
| 20280 | M | M.Eco19C14ORF20285P (100% identity) | GATC | M.Eco19C10ORF20280P |
| 20285 | PerC family transcriptional regulator | |||
| 20670 | HNH endonuclease | |||
| 20675 | R | EcoLR13ORF25810P (100% identity) | Eco19C10ORF20675P | |
| 20680 | 59 aa hypothetical protein | |||
| plasmid pRHB19-C10_2 | ||||
| 23630 | 103 aa hypothetical protein | |||
| 23635 | M | M.Eco746ORF25930P (100% identity) | M.Eco19C10ORF23635P | |
| 23640 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20480 | endoribonuclease SymE | |||
| 20485 | R | EcoVCSW5GmrSDP (100% identity) | Eco19C10GmrSDP | |
| 20490 | DUF1127 domain-containing protein | |||