Escherichia coli RHB19-C21 |
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Putative Escherichia coli RHB19-C21 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,090,505 bp | CP057643 |
| plasmid pRHB19-C21_2: | 146,281 bp | CP057644 |
REBASE acronym: Eco19C21
Org_num: 43291
All begin HVX54_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12350 | restriction endonuclease | |||
| 12355 | M | M.EcoGF33ORF19005P (100% identity) | M.Eco19C21ORF12355P | |
| ??? | S | S.SdySWHE2ORF4295P (99% identity) | S.Eco19C21ORF12355P | |
| 12365 | R | SdySWHE2ORF4295P (100% identity) | Eco19C21ORF12355P | |
| 12370 | endoribonuclease SymE | |||
| 15995 | transposase | |||
| 16000 | R | Ecoi012ORF18325P (100% identity) | Eco19C21ORF16005P | |
| 16005 | M | M.EcosEC2ORF410P (100% identity) | M.Eco19C21ORF16005P | |
| 16010 | S | S.Eco42405ORF475P (100% identity) | S.Eco19C21ORF16005P | |
| 16015 | AAA family ATPase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1340 | phosphohydrolase | |||
| 1345 | M | M.EcoXJ63DcmP (100% identity) | CCWGG | M.Eco19C21DcmP |
| 1350 | V | V.SsoSE61DcmP (99% identity) | V.Eco19C21DcmP | |
| 1355 | drug/metabolite exporter YedA | |||
| 3350 | DUF977 family protein | |||
| ??? | M | M.SsoSE61ORF20220P (100% identity) | M.Eco19C21ORF3355P | |
| 3360 | 60 aa hypothetical protein | |||
| 6060 | holin | |||
| 6070 | M | M.Eco33C09ORF985P (97% identity) | M.Eco19C21ORF6070P | |
| 6075 | TrmB family transcriptional regulator | |||
| 12570 | RM | SdyFF51ORF2365P (100% identity) | Eco19C21ORF12570P | |
| 12575 | DEAD/DEAH box helicase | |||
| 12605 | N-acetylneuraminic acid mutarotase | |||
| 12610 | R | SdyFF51ORF2325P (100% identity) | Eco19C21ORF12610P | |
| 12615 | 59 aa hypothetical protein | |||
| 17535 | cell division protein DamX | |||
| 17540 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco19C21DamP |
| 17545 | ribulose-phosphate 3-epimerase | |||
| 18050 | DUF2556 family protein | |||
| 18055 | M | M.SdyFF51ORF20390P (100% identity) | ATGCAT | M.Eco19C21ORF18055P |
| 18060 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB19-C21_2 | ||||
| 24710 | 73 aa hypothetical protein | |||
| 24715 | M | M.Sen4346ORF22715P (100% identity) | M.Eco19C21ORF24715P | |
| 24720 | 89 aa hypothetical protein | |||