Citrobacter species RHB20-C15 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Citrobacter species RHB20-C15 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,886,739 bp | CP057632 |
| plasmid pRHB20-C15_2: | 105,909 bp | CP057633 |
REBASE acronym: Cfr20C15
Org_num: 43276
All begin HVX63_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19910 | transposase | |||
| 19915 | R | Cfr20C16ORF19915P (100% identity) | Cfr20C15ORF19925P | |
| 19920 | S | S.Cfr20C16ORF19915P (100% identity) | S.Cfr20C15ORF19925P | |
| 19925 | M | M2.Cfr20C16ORF19915P (100% identity) | M2.Cfr20C15ORF19925P | |
| 19930 | M | M1.Cfr20C16ORF19915P (100% identity) | M1.Cfr20C15ORF19925P | |
| 19935 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1895 | cell division protein DamX | |||
| 1900 | M | M.CspY3DamP (100% identity) | GATC | M.Cfr20C15DamP |
| 1905 | ribulose-phosphate 3-epimerase | |||
| 2385 | DUF2556 family protein | |||
| 2390 | M | M.Cfr20C16ORF2380P (100% identity) | ATGCAT | M.Cfr20C15ORF2390P |
| 2395 | DNA-binding transcriptional regulator Fis | |||
| 3485 | DUF2732 family protein | |||
| 3490 | M | M.Cfr20C16ORF3480P (100% identity) | M.Cfr20C15ORF3490P | |
| 3495 | replication endonuclease | |||
| 6920 | 72 aa hypothetical protein | |||
| 6925 | M | M.Cfr20C16ORF6915P (100% identity) | M.Cfr20C15ORF6925P | |
| 6930 | site-specific DNA-methyltransferase | |||
| 6925 | DNA cytosine methyltransferase | |||
| 6930 | M | M.Cfr20C16ORF6920P (100% identity) | M.Cfr20C15ORF6930P | |
| 6935 | 137 aa hypothetical protein | |||
| 14215 | drug/metabolite exporter YedA | |||
| 14220 | V | V.CspY3DcmP (100% identity) | V.Cfr20C15DcmP | |
| 14225 | M | M.Cfr20C16DcmP (100% identity) | CCWGG | M.Cfr20C15DcmP |
| 14230 | phosphohydrolase | |||
| 17665 | LexA family transcriptional regulator | |||
| 17670 | M | M.Cfr20C16ORF17660P (100% identity) | M.Cfr20C15ORF17670P | |
| 17675 | phage N-6-adenine-methyltransferase | |||
| 17670 | DNA cytosine methyltransferase | |||
| 17675 | M | M.Cfr20C16ORF17665P (100% identity) | M.Cfr20C15ORF17675P | |
| 17680 | conserved phage C-terminal domain-containing | |||
| 19695 | HNH endonuclease | |||
| 19700 | R | Cfr20C16ORF19690P (100% identity) | Cfr20C15ORF19700P | |
| 19705 | SLATT domain-containing protein | |||
| 22215 | replication endonuclease | |||
| 22220 | M | M.Cfr20C16ORF22210P (100% identity) | M.Cfr20C15ORF22220P | |
| 22225 | 54 aa hypothetical protein | |||
| plasmid pRHB20-C15_2 | ||||
| 23850 | 76 aa hypothetical protein | |||
| 23855 | M | M.Cfr20C16ORF23795P (100% identity) | M.Cfr20C15ORF23855P | |
| 23860 | 280 aa hypothetical protein | |||