Citrobacter species RHB20-C16 |
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Putative Citrobacter species RHB20-C16 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,885,668 bp | CP057630 |
| plasmid pRHB20-C16_2: | 105,909 bp | CP057631 |
REBASE acronym: Cfr20C16
Org_num: 43277
All begin HVX64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19900 | transposase | |||
| 19905 | R | Cfr20C15ORF19925P (100% identity) | Cfr20C16ORF19915P | |
| 19910 | S | S.Cfr20C15ORF19925P (100% identity) | S.Cfr20C16ORF19915P | |
| 19915 | M | M2.Cfr20C15ORF19925P (100% identity) | M2.Cfr20C16ORF19915P | |
| 19920 | M | M1.Cfr20C15ORF19925P (100% identity) | M1.Cfr20C16ORF19915P | |
| 19925 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1885 | cell division protein DamX | |||
| 1890 | M | M.CspY3DamP (100% identity) | GATC | M.Cfr20C16DamP |
| 1895 | ribulose-phosphate 3-epimerase | |||
| 2375 | DUF2556 family protein | |||
| 2380 | M | M.Cfr20C15ORF2390P (100% identity) | ATGCAT | M.Cfr20C16ORF2380P |
| 2385 | DNA-binding transcriptional regulator Fis | |||
| 3475 | DUF2732 family protein | |||
| 3480 | M | M.Cfr20C15ORF3490P (100% identity) | M.Cfr20C16ORF3480P | |
| 3485 | replication endonuclease | |||
| 6910 | 72 aa hypothetical protein | |||
| 6915 | M | M.Cfr20C15ORF6925P (100% identity) | M.Cfr20C16ORF6915P | |
| 6920 | site-specific DNA-methyltransferase | |||
| 6915 | DNA cytosine methyltransferase | |||
| 6920 | M | M.Cfr20C15ORF6930P (100% identity) | M.Cfr20C16ORF6920P | |
| 6925 | 137 aa hypothetical protein | |||
| 14205 | drug/metabolite exporter YedA | |||
| 14210 | V | V.CspY3DcmP (100% identity) | V.Cfr20C16DcmP | |
| 14215 | M | M.Cfr20C15DcmP (100% identity) | CCWGG | M.Cfr20C16DcmP |
| 14220 | phosphohydrolase | |||
| 17655 | LexA family transcriptional regulator | |||
| 17660 | M | M.Cfr20C15ORF17670P (100% identity) | M.Cfr20C16ORF17660P | |
| 17665 | phage N-6-adenine-methyltransferase | |||
| 17660 | DNA cytosine methyltransferase | |||
| 17665 | M | M.Cfr20C15ORF17675P (100% identity) | M.Cfr20C16ORF17665P | |
| 17670 | conserved phage C-terminal domain-containing | |||
| 19685 | HNH endonuclease | |||
| 19690 | R | Cfr20C15ORF19700P (100% identity) | Cfr20C16ORF19690P | |
| 19695 | SLATT domain-containing protein | |||
| 22205 | replication endonuclease | |||
| 22210 | M | M.Cfr20C15ORF22220P (100% identity) | M.Cfr20C16ORF22210P | |
| 22215 | 54 aa hypothetical protein | |||
| plasmid pRHB20-C16_2 | ||||
| 23790 | 280 aa hypothetical protein | |||
| 23795 | M | M.Cfr20C15ORF23855P (100% identity) | M.Cfr20C16ORF23795P | |
| 23800 | 76 aa hypothetical protein | |||