Escherichia coli RHB21-C09 |
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Putative Escherichia coli RHB21-C09 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,126,629 bp | CP057603 |
| plasmid pRHB21-C09_2: | 156,205 bp | CP057604 |
REBASE acronym: Eco21C09
Org_num: 43303
All begin HVX75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21200 | adenine/cytosine-specific restriction | |||
| 21205 | R | Eco36C20ORF21195P (100% identity) | Eco21C09ORF21210P | |
| 21210 | M | M.Eco36C20ORF21195P (100% identity) | M.Eco21C09ORF21210P | |
| 21215 | S | S.Eco36C20ORF21195P (100% identity) | S.Eco21C09ORF21210P | |
| 21220 | endoribonuclease SymE | |||
| 21485 | DUF4942 domain-containing protein | |||
| 21490 | M | M.Eco36C20ORF21465P (100% identity) | M.Eco21C09ORF21490P | |
| 21495 | S | S.Eco36C20ORF21465P (100% identity) | S.Eco21C09ORF21490P | |
| 21500 | R | Eco36C20ORF21465P (99% identity) | Eco21C09ORF21490P | |
| 21510 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1850 | cell division protein DamX | |||
| 1855 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco21C09DamP |
| 1860 | ribulose-phosphate 3-epimerase | |||
| 2405 | DUF2556 family protein | |||
| 2410 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco21C09ORF2410P |
| 2415 | DNA-binding transcriptional regulator Fis | |||
| 6075 | DUF3850 domain-containing protein | |||
| 6080 | M | M.Eco36C20ORF6080P (100% identity) | GATC | M.Eco21C09ORF6080P |
| 6085 | replication endonuclease | |||
| 9675 | phosphohydrolase | |||
| 9680 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco21C09DcmP |
| 9685 | V | V.EcoR42DcmP (100% identity) | V.Eco21C09DcmP | |
| 9690 | drug/metabolite exporter YedA | |||
| 15205 | 92 aa hypothetical protein | |||
| 15210 | M | M.Lsp2021ORF20390P (100% identity) | M.Eco21C09ORF15210P | |
| 15215 | TrmB family transcriptional regulator | |||
| 17905 | DUF1317 family protein | |||
| 17910 | M | M.Sbo812ORFAP (100% identity) | M.Eco21C09ORF17910P | |
| 17915 | cell division protein ZapA | |||
| 21465 | HNH endonuclease | |||
| 21470 | R | Eco36C20ORF21445P (100% identity) | Eco21C09ORF21470P | |
| 21475 | McrC family protein | |||
| plasmid pRHB21-C09_2 | ||||
| 25175 | 73 aa hypothetical protein | |||
| 25180 | M | M.SflN92ORF24820P (100% identity) | M.Eco21C09ORF25180P | |
| 25185 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21195 | GTPase | |||
| 21200 | R | Ssp28760MrrP (100% identity) | Eco21C09MrrP | |
| 21205 | type I restriction-modification system | |||
| 21220 | endoribonuclease SymE | |||
| 21225 | R | Eco36C20McrBP (100% identity) | Eco21C09McrB2P | |
| 21230 | R | Eco36C20McrCP (100% identity) | Eco21C09McrC2P | |
| 21235 | 111 aa hypothetical protein | |||
| 21470 | HNH endonuclease | |||
| 21475 | R | Eco36C20McrC2P (100% identity) | Eco21C09McrCP | |
| 21480 | R | Eco36C20McrB2P (100% identity) | Eco21C09McrBP | |
| 21485 | DUF4942 domain-containing protein | |||