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Putative Escherichia coli RHB22-C04 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 5,122,695 bp | CP057587 |
plasmid pRHB22-C04_2: | 156,576 bp | CP057588 |
REBASE acronym: Eco22C04
Org_num: 43308
All begin HVX83_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21185 | adenine/cytosine-specific restriction | |||
21190 | R | Eco36C20ORF21195P (100% identity) | Eco22C04ORF21195P | |
21195 | M | M.Eco36C20ORF21195P (100% identity) | M.Eco22C04ORF21195P | |
21200 | S | S.Eco36C20ORF21195P (100% identity) | S.Eco22C04ORF21195P | |
21205 | endoribonuclease SymE | |||
21460 | DUF4942 domain-containing protein | |||
21465 | M | M.Eco36C20ORF21465P (100% identity) | M.Eco22C04ORF21465P | |
21470 | S | S.Eco36C20ORF21465P (100% identity) | S.Eco22C04ORF21465P | |
21475 | R | Eco36C20ORF21465P (100% identity) | Eco22C04ORF21465P | |
21485 | NADPH-dependent aldehyde reductase Ahr | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
1850 | cell division protein DamX | |||
1855 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco22C04DamP |
1860 | ribulose-phosphate 3-epimerase | |||
2405 | DUF2556 family protein | |||
2410 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.Eco22C04ORF2410P |
2415 | DNA-binding transcriptional regulator Fis | |||
6070 | DUF3850 domain-containing protein | |||
6075 | M | M.Eco36C20ORF6080P (100% identity) | GATC | M.Eco22C04ORF6075P |
6080 | replication endonuclease | |||
9675 | phosphohydrolase | |||
9680 | M | M.SdySWHE2DcmP (100% identity) | CCWGG | M.Eco22C04DcmP |
9685 | V | V.EcoR42DcmP (100% identity) | V.Eco22C04DcmP | |
9690 | drug/metabolite exporter YedA | |||
15205 | 92 aa hypothetical protein | |||
15210 | M | M.Lsp2021ORF20390P (100% identity) | M.Eco22C04ORF15210P | |
15215 | TrmB family transcriptional regulator | |||
17895 | DUF1317 family protein | |||
17900 | M | M.Sbo812ORFAP (100% identity) | M.Eco22C04ORF17900P | |
17905 | cell division protein ZapA | |||
21440 | HNH endonuclease | |||
21445 | R | Eco36C20ORF21445P (100% identity) | Eco22C04ORF21445P | |
21450 | McrC family protein | |||
plasmid pRHB22-C04_2 | ||||
25155 | 73 aa hypothetical protein | |||
25160 | M | M.SflN92ORF24820P (100% identity) | M.Eco22C04ORF25160P | |
25165 | 101 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
21180 | GTPase | |||
21185 | R | Ssp28760MrrP (100% identity) | Eco22C04MrrP | |
21190 | type I restriction-modification system | |||
21205 | endoribonuclease SymE | |||
21210 | R | Eco36C20McrBP (100% identity) | Eco22C04McrB2P | |
21215 | R | Eco36C20McrCP (100% identity) | Eco22C04McrC2P | |
21220 | 111 aa hypothetical protein | |||
21445 | HNH endonuclease | |||
21450 | R | Eco36C20McrC2P (100% identity) | Eco22C04McrCP | |
21455 | R | Eco36C20McrB2P (100% identity) | Eco22C04McrBP | |
21460 | DUF4942 domain-containing protein |