Escherichia coli RHB22-C06 |
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Putative Escherichia coli RHB22-C06 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,800,819 bp | CP057582 |
| plasmid pRHB22-C06_2: | 60,402 bp | CP057583 |
REBASE acronym: Eco22C06
Org_num: 43310
All begin HVX85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19855 | 322 aa hypothetical protein | |||
| 19860 | R | SflN101ORF11675P (100% identity) | CCANNNNNNNNNTTGG | Eco22C06ORF19865P |
| 19865 | M | M.SspS13ORF3945P (100% identity) | CCANNNNNNNNNTTGG | M.Eco22C06ORF19865P |
| 19870 | S | S.Eco41E2C07ORF19960P (100% identity) | CCANNNNNNNNNTTGG | S.Eco22C06ORF19865P |
| 19875 | endoribonuclease SymE | |||
| 20085 | 128 aa hypothetical protein | |||
| 20090 | M | M.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | M.Eco22C06ORF20090P |
| 20095 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco22C06ORF20090P |
| 20100 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1645 | cell division protein DamX | |||
| 1650 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco22C06DamP |
| 1655 | ribulose-phosphate 3-epimerase | |||
| 2175 | DUF2556 family protein | |||
| 2180 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco22C06ORF2180P |
| 2185 | DNA-binding transcriptional regulator Fis | |||
| 9170 | phosphohydrolase | |||
| 9175 | M | M.EcoR5DcmP (100% identity) | CCWGG | M.Eco22C06DcmP |
| 9180 | V | V.EcoR5DcmP (100% identity) | V.Eco22C06DcmP | |
| 9185 | drug/metabolite exporter YedA | |||
| 14985 | replication endonuclease | |||
| 14990 | M | M.KpnRKPORF17480P (100% identity) | GATC | M.Eco22C06ORF14990P |
| 14995 | TraR/DksA family transcriptional regulator | |||
| 17955 | 253 aa hypothetical protein | |||
| 17960 | R | Ecos67ORF8885P (100% identity) | Eco22C06ORF17965P | |
| 17965 | M | M.Ecos67ORF8885P (100% identity) | M.Eco22C06ORF17965P | |
| 17970 | 59 aa hypothetical protein | |||
| 20065 | HNH endonuclease | |||
| 20070 | R | SflN101ORF11875P (100% identity) | Eco22C06ORF20070P | |
| 20075 | AAA family ATPase | |||
| plasmid pRHB22-C06_2 | ||||
| 23225 | 73 aa hypothetical protein | |||
| 23230 | M | M.SflN92ORF24820P (100% identity) | M.Eco22C06ORF23230P | |
| 23235 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19875 | endoribonuclease SymE | |||
| ??? | R | EcoW122GmrDP (100% identity) | Eco22C06GmrDP | |
| 19885 | R | SflN101GmrSP (100% identity) | Eco22C06GmrSP | |
| 19890 | DUF1127 domain-containing protein | |||
| 20070 | HNH endonuclease | |||
| 20075 | R | SflN101McrBP (100% identity) | Eco22C06McrBP | |
| 20080 | R | SflN101McrCP (100% identity) | Eco22C06McrCP | |
| 20085 | 128 aa hypothetical protein | |||