Escherichia coli RHB23-C03 |
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Putative Escherichia coli RHB23-C03 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,757,236 bp | CP057559 |
| plasmid pRHB23-C03_2: | 109,880 bp | CP057560 |
REBASE acronym: Eco23C03
Org_num: 43315
All begin HVX93_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19315 | adenine/cytosine-specific restriction | |||
| 19320 | R | Eco42C22ORF11485P (99% identity) | Eco23C03ORF19325P | |
| 19325 | M | M.EcoA30I (100% identity) | M.Eco23C03ORF19325P | |
| 19330 | S | S.Eal40ORF20425P (65% identity) | S.Eco23C03ORF19325P | |
| 19335 | endoribonuclease SymE | |||
| 20645 | IS3 family transposase | |||
| 20650 | C | C.VchVC53ORF2495P (100% identity) | C.Eco23C03ORF20655P | |
| 20655 | M | M.Van11008III (99% identity) | M.Eco23C03ORF20655P | |
| 20660 | S | S.Psh10363II (76% identity) | S.Eco23C03ORF20655P | |
| 20665 | R | VchV1116ORFBP (82% identity) | Eco23C03ORF20655P | |
| 20670 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1720 | cell division protein DamX | |||
| 1725 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco23C03DamP |
| 1730 | ribulose-phosphate 3-epimerase | |||
| 2345 | DUF2556 family protein | |||
| 2350 | M | M.EcosS1ORF18905P (100% identity) | ATGCAT | M.Eco23C03ORF2350P |
| 2355 | DNA-binding transcriptional regulator Fis | |||
| 8390 | 257 aa hypothetical protein | |||
| 8395 | R | EcoC1734ORF8975P (100% identity) | Eco23C03ORF8395P | |
| 8400 | transcription factor | |||
| 9115 | phosphohydrolase | |||
| 9120 | M | M.SflC32DcmP (100% identity) | CCWGG | M.Eco23C03DcmP |
| 9125 | V | V.Ecostr9DcmP (73% identity) | V.Eco23C03DcmP | |
| 9130 | drug/metabolite exporter YedA | |||
| 14520 | replication endonuclease | |||
| 14525 | M | M.SspPIBORF14580P (100% identity) | GATC | M.Eco23C03ORF14525P |
| 14530 | TraR/DksA family transcriptional regulator | |||
| 19535 | HNH endonuclease | |||
| 19540 | R | Ecoi362ORF3874P (99% identity) | Eco23C03ORF19540P | |
| 19545 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19310 | GTPase | |||
| 19315 | R | Ssp28760MrrP (100% identity) | Eco23C03MrrP | |
| 19320 | type I restriction-modification system | |||
| 19335 | endoribonuclease SymE | |||
| 19340 | R | Eco42C22McrBP (99% identity) | Eco23C03McrBP | |
| 19345 | R | Eco42C22McrCP (100% identity) | Eco23C03McrCP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pRHB23-C03_2 | ||||
| 23080 | 76 aa hypothetical protein | |||
| 23085 | M | M.Sso524ORF460P (100% identity) | M.Eco23C03ORF23085P | |
| 23090 | 269 aa hypothetical protein | |||