Escherichia coli RHB23-C06 |
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Putative Escherichia coli RHB23-C06 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,792,619 bp | CP057539 |
| plasmid pRHB23-C06_2: | 98,678 bp | CP057540 |
| plasmid pRHB23-C06_3: | 60,884 bp | CP057541 |
REBASE acronym: Eco23C06
Org_num: 43318
All begin HVX96_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11785 | DUF4942 domain-containing protein | |||
| 11790 | M | M.EcoW26ORF3070P (100% identity) | M.Eco23C06ORF11790P | |
| 11795 | S | S.SdyFF10ORF20075P (100% identity) | S.Eco23C06ORF11790P | |
| 11800 | R | SdyFF10ORF20075P (100% identity) | Eco23C06ORF11790P | |
| 11810 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1040 | phosphohydrolase | |||
| 1045 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco23C06DcmP |
| 1050 | V | V.SsoSE61DcmP (100% identity) | V.Eco23C06DcmP | |
| 1055 | drug/metabolite exporter YedA | |||
| 5355 | LexA family transcriptional regulator | |||
| 5360 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco23C06ORF5360P |
| 5365 | PerC family transcriptional regulator | |||
| 11335 | LexA family transcriptional regulator | |||
| 11340 | M | M.EcoTO6ORF3546P (100% identity) | GATC | M.Eco23C06ORF11340P |
| 11345 | PerC family transcriptional regulator | |||
| 12485 | transcriptional regulator | |||
| 12495 | M | M.Eco37C15ORF12455P (100% identity) | GGCGCC | M.Eco23C06ORF12495P |
| 12500 | R | Eco43SOC05ORF12795P (100% identity) | GGCGCC | Eco23C06ORF12495P |
| 12505 | C | C.Eco8E3C05ORF20755P (100% identity) | C.Eco23C06ORF12495P | |
| 12510 | lysine decarboxylation/transport transcriptional | |||
| 16465 | cell division protein DamX | |||
| 16470 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco23C06DamP |
| 16475 | ribulose-phosphate 3-epimerase | |||
| 17020 | DUF2556 family protein | |||
| 17025 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco23C06ORF17025P |
| 17030 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB23-C06_2 | ||||
| 23135 | 103 aa hypothetical protein | |||
| 23140 | M | M.SspPIBORF23080P (100% identity) | M.Eco23C06ORF23140P | |
| 23145 | 73 aa hypothetical protein | |||
| plasmid pRHB23-C06_3 | ||||
| 23600 | 83 aa hypothetical protein | |||
| 23605 | M | M.Sen624ORF24870P (100% identity) | M.Eco23C06ORF23605P | |
| 23610 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4855 | isocitrate dehydrogenase | |||
| 4860 | R | EcosEC27McrCP (100% identity) | Eco23C06McrCP | |
| 4865 | R | EmaE2C08McrBP (100% identity) | Eco23C06McrBP | |
| 4870 | tail fiber assembly protein | |||
| 5160 | isocitrate dehydrogenase | |||
| 5165 | R | EcoRS76GmrSDP (100% identity) | Eco23C06GmrSDP | |
| 5170 | recombinase family protein | |||