Escherichia coli RHB23-C11 |
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Putative Escherichia coli RHB23-C11 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,926,309 bp | CP057523 |
| plasmid pRHB23-C11_2: | 86,339 bp | CP057524 |
REBASE acronym: Eco23C11
Org_num: 43321
All begin HVX99_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12680 | 128 aa hypothetical protein | |||
| 12685 | M | M.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | M.Eco23C11ORF12685P |
| 12690 | S | S.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | S.Eco23C11ORF12685P |
| 12695 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 840 | phosphohydrolase | |||
| 845 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco23C11DcmP |
| 850 | V | V.SsoSE61DcmP (100% identity) | V.Eco23C11DcmP | |
| 855 | drug/metabolite exporter YedA | |||
| 5705 | LexA family transcriptional regulator | |||
| 5710 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco23C11ORF5710P |
| 5715 | PerC family transcriptional regulator | |||
| 6745 | 92 aa hypothetical protein | |||
| 6750 | M | M.Lsp2021ORF20390P (100% identity) | M.Eco23C11ORF6750P | |
| 6755 | TrmB family transcriptional regulator | |||
| 7685 | replication endonuclease | |||
| 7690 | M | M.Eco36C05ORF7460P (100% identity) | GATC | M.Eco23C11ORF7690P |
| 7695 | TraR/DksA family transcriptional regulator | |||
| 9530 | DUF1317 family protein | |||
| 9535 | M | M.EfeC13ORF14690P (100% identity) | M.Eco23C11ORF9535P | |
| 9540 | cell division protein ZapA | |||
| 12660 | HNH endonuclease | |||
| 12665 | R | SflFF71ORF17385P (100% identity) | Eco23C11ORF12665P | |
| 12670 | AAA family ATPase | |||
| 12780 | Polarity suppression protein | |||
| 12785 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco23C11ORF12785P |
| 12790 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco23C11ORF12785P |
| 12795 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco23C11ORF12785P |
| 12800 | integrase arm-type DNA-binding domain-containing | |||
| 17455 | cell division protein DamX | |||
| 17460 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco23C11DamP |
| 17465 | ribulose-phosphate 3-epimerase | |||
| 18010 | DUF2556 family protein | |||
| 18015 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco23C11ORF18015P |
| 18020 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB23-C11_2 | ||||
| 24210 | 73 aa hypothetical protein | |||
| 24215 | M | M.Eco4C08ORF23545P (100% identity) | M.Eco23C11ORF24215P | |
| 24220 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5495 | isocitrate dehydrogenase | |||
| 5500 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco23C11ORF5500P |
| 5505 | site-specific DNA recombinase | |||
| 12665 | HNH endonuclease | |||
| 12670 | R | SflN101McrBP (100% identity) | Eco23C11McrBP | |
| 12675 | R | SflFF71McrCP (100% identity) | Eco23C11McrCP | |
| 12680 | 128 aa hypothetical protein | |||