|
Putative Escherichia coli RHB24-C09 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Sequence length: | GenBank #: | |
Chromosome: | 5,101,139 bp | CP057500 |
plasmid pRHB24-C09_2: | 74,587 bp | CP057501 |
REBASE acronym: EcoC09
Org_num: 43066
All begin HVY09_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
18015 | endoribonuclease SymE | |||
18020 | S | S.Cfr477ORF19330P (82% identity) | S.EcoC09ORF18025P | |
18025 | M | M.SspS13ORF3945P (100% identity) | M.EcoC09ORF18025P | |
18030 | R | EcoXH993ORF23720P (99% identity) | EcoC09ORF18025P | |
18035 | 322 aa hypothetical protein | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
2125 | DUF1737 domain-containing protein | |||
2135 | M | M.EcoES5ORF11950P (99% identity) | M.EcoC09ORF2135P | |
2140 | TrmB family transcriptional regulator | |||
4865 | NinE family protein | |||
4870 | M | M.SflN97ORF15810P (100% identity) | GATC | M.EcoC09ORF4870P |
4875 | recombination protein NinB | |||
5490 | drug/metabolite exporter YedA | |||
5495 | V | V.SflFF59DcmP (100% identity) | V.EcoC09DcmP | |
5500 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoC09DcmP |
5505 | phosphohydrolase | |||
7505 | NinE family protein | |||
7510 | M | M.SflWW1ORF7070P (99% identity) | GATC | M.EcoC09ORF7510P |
7515 | recombination protein NinB | |||
8985 | DNA primase | |||
8990 | R | Sens24184ORF5380P (100% identity) | C | EcoC09ORF8990P |
8995 | AIDA repeat-containing protein | |||
10170 | 536 aa hypothetical protein | |||
10175 | R | Eco34C16ORF19610P (100% identity) | GCWGC | EcoC09ORF10175P |
10180 | helix-turn-helix transcriptional regulator | |||
12330 | DNA-binding transcriptional regulator Fis | |||
12335 | M | M.EcoW102ORF2375P (99% identity) | ATGCAT | M.EcoC09ORF12335P |
12340 | DUF2556 family protein | |||
12845 | ribulose-phosphate 3-epimerase | |||
12850 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC09DamP |
12855 | cell division protein DamX | |||
17785 | 59 aa hypothetical protein | |||
17790 | R | SflFF17ORF19275P (100% identity) | EcoC09ORF17790P | |
17795 | HNH endonuclease | |||
plasmid pRHB24-C09_2 | ||||
24960 | 103 aa hypothetical protein | |||
24965 | M | M.EcoBU11ORF26655P (100% identity) | SAY | M.EcoC09ORF24965P |
24970 | 73 aa hypothetical protein | |||
Orphan M | ||||
ORF | Gene | Most similar | Specificity | Name |
Chromosome | ||||
24745 | recombination protein NinB | |||
24750 | M | M.SflN97ORF8425P (100% identity) | GATC | M.EcoC09ORF24750P |
24755 | NinE family protein |