Escherichia coli RHB25-C16 |
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Putative Escherichia coli RHB25-C16 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,253,821 bp | CP057473 |
| plasmid pRHB25-C16_2: | 83,477 bp | CP057474 |
REBASE acronym: Eco25C16
Org_num: 43074
All begin HVY23_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4390 | PerC family transcriptional regulator | |||
| 4395 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco25C16ORF4395P |
| 4400 | LexA family transcriptional regulator | |||
| 5925 | PerC family transcriptional regulator | |||
| 5930 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco25C16ORF5930P |
| 5935 | LexA family transcriptional regulator | |||
| 7320 | recombination protein NinB | |||
| 7325 | M | M.EcoS7380ORFIP (94% identity) | GATC | M.Eco25C16ORF7325P |
| 7330 | NinE family protein | |||
| 9855 | TrmB family transcriptional regulator | |||
| 9860 | M | M.EcoSO179ORF21175P (100% identity) | M.Eco25C16ORF9860P | |
| 9875 | tellurite resistance TerB family protein | |||
| 10200 | PerC family transcriptional regulator | |||
| 10205 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco25C16ORF10205P |
| 10210 | LexA family transcriptional regulator | |||
| 14530 | drug/metabolite exporter YedA | |||
| 14535 | V | V.SflFF59DcmP (100% identity) | V.Eco25C16DcmP | |
| 14540 | M | M.EcoS7380DcmP (100% identity) | CCWGG | M.Eco25C16DcmP |
| 14545 | phosphohydrolase | |||
| 17105 | Com family DNA-binding transcriptional | |||
| 17110 | M | M.Eco7SOC04ORF7470P (100% identity) | M.Eco25C16ORF17110P | |
| 17115 | flagella biosynthesis regulator Flk | |||
| 22380 | DNA-binding transcriptional regulator Fis | |||
| 22385 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco25C16ORF22385P |
| 22390 | DUF2556 family protein | |||
| 22935 | ribulose-phosphate 3-epimerase | |||
| 22940 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco25C16DamP |
| 22945 | cell division protein DamX | |||
| plasmid pRHB25-C16_2 | ||||
| 26255 | 73 aa hypothetical protein | |||
| 26260 | M | M.SflN92ORF24820P (100% identity) | M.Eco25C16ORF26260P | |
| 26265 | 101 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10410 | site-specific DNA recombinase | |||
| 10415 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco25C16ORF10415P |
| 10420 | isocitrate dehydrogenase | |||