Escherichia coli RHB27-C17 |
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Putative Escherichia coli RHB27-C17 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,723,222 bp | CP057420 |
| plasmid pRHB27-C17_2: | 97,526 bp | CP057421 |
| plasmid pRHB27-C17_3: | 52,356 bp | CP057422 |
REBASE acronym: Eco27C17
Org_num: 43089
All begin HVY44_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19630 | restriction endonuclease | |||
| 19635 | M | M.SflSTLE3ORF19325P (100% identity) | M.Eco27C17ORF19635P | |
| 19640 | S | S.SflSTLE3ORF19325P (50% identity) | S1.Eco27C17ORF19635P | |
| 19645 | IS1-like element IS1A family transposase | |||
| 19650 | S | S2.Eco27C18ORF19615P (100% identity) | S2.Eco27C17ORF19635P | |
| 19655 | R | SflSTLE3ORF19325P (100% identity) | Eco27C17ORF19635P | |
| 19660 | endoribonuclease SymE | |||
| plasmid pRHB27-C17_2 | ||||
| 23320 | DNA polymerase III subunit theta | |||
| 23325 | M | M.Eco27C18ORF23300P (100% identity) | GAANNNNNNTAYG | M.Eco27C17ORF23325P |
| 23330 | S | S.Ecoi162ORF4671P (100% identity) | GAANNNNNNTAYG | S.Eco27C17ORF23325P |
| 23335 | R | Eco34C14ORF22480P (100% identity) | GAANNNNNNTAYG | Eco27C17ORF23325P |
| 23340 | 3-phosphatase | |||
| plasmid pRHB27-C17_3 | ||||
| 23505 | IS3 family transposase | |||
| 23510 | R | SflSTLE3ORF22785P (100% identity) | Eco27C17ORF23525P | |
| 23515 | DUF4268 domain-containing protein | |||
| 23520 | S | S.Eco27C18ORF23500P (100% identity) | S.Eco27C17ORF23525P | |
| 23525 | M | M.Sen557928ORF18960P (62% identity) | M.Eco27C17ORF23525P | |
| 23530 | regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1760 | cell division protein DamX | |||
| 1765 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco27C17DamP |
| 1770 | ribulose-phosphate 3-epimerase | |||
| 2385 | DUF2556 family protein | |||
| 2390 | M | M.Sso8ORF2545P (100% identity) | ATGCAT | M.Eco27C17ORF2390P |
| 2395 | DNA-binding transcriptional regulator Fis | |||
| 3425 | DEAD/DEAH box helicase | |||
| 3430 | RM | SflLIN17ORF3140P (100% identity) | Eco27C17ORF3430P | |
| 3435 | transposase | |||
| 9095 | phosphohydrolase | |||
| 9100 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco27C17DcmP |
| 9105 | V | V.SflFF64DcmP (100% identity) | V.Eco27C17DcmP | |
| 9110 | drug/metabolite exporter YedA | |||
| plasmid pRHB27-C17_2 | ||||
| 23430 | SPFH/Band 7/PHB domain protein | |||
| 23450 | M | M.Eco34C14ORF22605P (100% identity) | M.Eco27C17ORF23450P | |
| 23455 | recombination-associated protein RdgC | |||