Escherichia fergusonii RHB28-C21 |
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Putative Escherichia fergusonii RHB28-C21 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,655,461 bp | CP057357 |
| plasmid pRHB28-C21_2: | 285,327 bp | CP057358 |
| plasmid pRHB28-C21_3: | 100,338 bp | CP057359 |
REBASE acronym: Efe28C21
Org_num: 43209
All begin HVY57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4800 | GTPase family protein | |||
| 4805 | M | M.Efe1ORFIP (93% identity) | M.Efe28C21ORF4805P | |
| 4810 | S | S.Efe1ORFIP (100% identity) | S.Efe28C21ORF4805P | |
| 4815 | R | Efe1ORFIP (100% identity) | Efe28C21ORF4805P | |
| 4820 | IS5-like element ISKpn26 family transposase | |||
| 8910 | GTPase family protein | |||
| 8915 | M | M.EcoC27AORF14740P (99% identity) | M.Efe28C21ORF8915P | |
| 8920 | S | S.Efe41C20ORF17415P (100% identity) | S.Efe28C21ORF8915P | |
| 8925 | R | EfeC23ORF13600P (100% identity) | Efe28C21ORF8915P | |
| 8930 | IS1 family transposase | |||
| 9870 | DUF262 domain-containing protein | |||
| 9875 | M | M.Elu333czORF25P (100% identity) | GNTAYNNNNNCTC | M.Efe28C21ORF9875P |
| 9880 | S | S.Efe253ORF329P (100% identity) | GNTAYNNNNNCTC | S.Efe28C21ORF9875P |
| 9885 | R | Efe253ORF329P (100% identity) | GNTAYNNNNNCTC | Efe28C21ORF9875P |
| 9890 | 112 aa hypothetical protein | |||
| plasmid pRHB28-C21_3 | ||||
| 24040 | IS1 family transposase | |||
| 24045 | R | EcoXHORF21684P (88% identity) | Efe28C21ORF24055P | |
| 24050 | S | S.SspS13ORF175P (100% identity) | S.Efe28C21ORF24055P | |
| 24055 | M | M.EcoF374ORF24310P (99% identity) | M.Efe28C21ORF24055P | |
| 24060 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11495 | DNA-binding transcriptional regulator Fis | |||
| 11500 | M | M.EfeTORF37040P (100% identity) | M.Efe28C21ORF11500P | |
| 11505 | DUF2556 family protein | |||
| 12030 | ribulose-phosphate 3-epimerase | |||
| 12035 | M | M.EfeTDamP (100% identity) | M.Efe28C21DamP | |
| 12040 | cell division protein DamX | |||
| 15490 | bifunctional isocitrate dehydrogenase | |||
| 15495 | M | M.EfeC10ORF1445P (100% identity) | M.Efe28C21ORF15495P | |
| 15500 | glyoxylate bypass operon transcriptional | |||
| 20375 | serine/threonine protein phosphatase | |||
| 20380 | M | M.Efe41C20ORF6615P (83% identity) | M.Efe28C21ORF20380P | |
| 20385 | 62 aa hypothetical protein | |||
| 21140 | flagella biosynthesis regulator Flk | |||
| 21145 | M | M.Efe65411ORF7205P (100% identity) | M.Efe28C21ORF21145P | |
| 21150 | Com family DNA-binding transcriptional | |||
| plasmid pRHB28-C21_2 | ||||
| 23190 | 55 aa hypothetical protein | |||
| 23195 | M | M.YpsF1ORFCP (100% identity) | M.Efe28C21ORF23195P | |
| 23200 | thermonuclease family protein | |||
| 23650 | 48 aa hypothetical protein | |||
| 23655 | M | M.YpsF1ORFBP (100% identity) | M.Efe28C21ORF23655P | |
| 23660 | 202 aa hypothetical protein | |||
| 23850 | DNA-binding protein | |||
| 23855 | M | M.SenBL10ORFDP (100% identity) | M.Efe28C21ORF23855P | |
| 23860 | 284 aa hypothetical protein | |||
| plasmid pRHB28-C21_3 | ||||
| 23915 | recombination-associated protein RdgC | |||
| 23920 | M | M.EcoCEC31ORF47180P (99% identity) | M.Efe28C21ORF23920P | |
| 23935 | SPFH/Band 7/PHB domain protein | |||