Escherichia coli RHB33-C11 |
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Putative Escherichia coli RHB33-C11 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,227,024 bp | CP057200 |
| plasmid pRHB33-C11_2: | 105,591 bp | CP057201 |
| plasmid pRHB33-C11_3: | 73,991 bp | CP057202 |
REBASE acronym: Eco33C11
Org_num: 43128
All begin HVZ12_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1685 | cell division protein DamX | |||
| 1690 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco33C11DamP |
| 1695 | ribulose-phosphate 3-epimerase | |||
| 2240 | DUF2556 family protein | |||
| 2245 | M | M.Eco37C20ORF2255P (100% identity) | ATGCAT | M.Eco33C11ORF2245P |
| 2250 | DNA-binding transcriptional regulator Fis | |||
| 4065 | conjugal transfer protein TraG N-terminal | |||
| 4070 | M | M2.EcoA41ORF21415P (100% identity) | GGCGGA | M1.Eco33C11ORF4070P |
| ??? | M | M1.EcoA41ORF21415P (99% identity) | GGCGGA | M2.Eco33C11ORF4070P |
| 4080 | R | EcoA41ORF21415P (97% identity) | GGCGGA | Eco33C11ORF4070P |
| 4085 | transposase | |||
| 4495 | N-6 DNA methylase | |||
| 4500 | M | M.EcoKE41ORF8010P (100% identity) | M.Eco33C11ORF4500P | |
| 4505 | 130 aa hypothetical protein | |||
| 6280 | TraR/DksA family transcriptional regulator | |||
| 6285 | M | M.SflLIN17ORF14475P (100% identity) | GATC | M.Eco33C11ORF6285P |
| 6290 | replication endonuclease | |||
| 9755 | phosphohydrolase | |||
| 9760 | M | M.Ecoi648DcmP (100% identity) | CCWGG | M.Eco33C11DcmP |
| 9765 | V | V.Eco37C20DcmP (100% identity) | V.Eco33C11DcmP | |
| 9770 | drug/metabolite exporter YedA | |||
| 15750 | 92 aa hypothetical protein | |||
| 15755 | M | M.Lsp2021ORF20390P (100% identity) | M.Eco33C11ORF15755P | |
| 15760 | TrmB family transcriptional regulator | |||
| 21530 | IS3 family transposase | |||
| 21535 | M | M.EcoSE11DndBP (100% identity) | M.Eco33C11DndBP | |
| 21540 | DNA phosphorothioation system sulfurtransferase | |||
| 21535 | DNA sulfur modification protein DndB | |||
| 21540 | M | M.EcoSE11DndCP (100% identity) | M.Eco33C11DndCP | |
| 21545 | DNA sulfur modification protein DndD | |||
| 21540 | DNA phosphorothioation system sulfurtransferase | |||
| 21545 | M | M.EcoMc31DndDP (100% identity) | M.Eco33C11DndDP | |
| 21550 | DNA sulfur modification protein DndE | |||
| 21545 | DNA sulfur modification protein DndD | |||
| 21550 | M | M.EcoSE11DndEP (100% identity) | M.Eco33C11DndEP | |
| 21555 | 206 aa hypothetical protein | |||
| 21560 | restriction endonuclease | |||
| 21565 | R | Eco44SOC01DptHP (99% identity) | Eco33C11DptHP | |
| 21570 | DNA phosphorothioation-dependent restriction | |||
| 21565 | DNA phosphorothioation-dependent restriction | |||
| 21570 | R | EcoSE11DptGP (100% identity) | Eco33C11DptGP | |
| 21575 | DNA phosphorothioation-dependent restriction | |||
| 21570 | DNA phosphorothioation-dependent restriction | |||
| 21575 | R | EcoSE11DptFP (100% identity) | Eco33C11DptFP | |
| 21580 | DUF4102 domain-containing protein | |||
| plasmid pRHB33-C11_2 | ||||
| 25890 | 73 aa hypothetical protein | |||
| 25895 | M | M.EcoSTEC383ORFGP (100% identity) | M.Eco33C11ORF25895P | |
| 25900 | 101 aa hypothetical protein | |||
| plasmid pRHB33-C11_3 | ||||
| 26040 | 103 aa hypothetical protein | |||
| 26045 | M | M.Sfl60ORF25670P (100% identity) | SAY | M.Eco33C11ORF26045P |
| 26050 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14495 | isocitrate dehydrogenase | |||
| 14500 | R | EcosEC27McrCP (100% identity) | Eco33C11McrCP | |
| 14505 | R | EmaE2C08McrBP (100% identity) | Eco33C11McrBP | |
| 14510 | tail fiber assembly protein | |||
| 21555 | 206 aa hypothetical protein | |||
| 21560 | R | EcoSE11MrrP (100% identity) | Eco33C11MrrP | |