Escherichia coli RHB36-C05 |
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Putative Escherichia coli RHB36-C05 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,891,275 bp | CP057137 |
| plasmid pRHB36-C05_2: | 86,321 bp | CP057138 |
REBASE acronym: Eco36C05
Org_num: 43150
All begin HVZ45_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 12450 | 128 aa hypothetical protein | |||
| 12455 | M | M.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | M.Eco36C05ORF12455P |
| 12460 | S | S.SflFF71ORF17365P (100% identity) | TGHAYNNNNCTNC | S.Eco36C05ORF12455P |
| 12465 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 840 | phosphohydrolase | |||
| 845 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco36C05DcmP |
| 850 | V | V.SsoSE61DcmP (100% identity) | V.Eco36C05DcmP | |
| 855 | drug/metabolite exporter YedA | |||
| 5475 | LexA family transcriptional regulator | |||
| 5480 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco36C05ORF5480P |
| 5485 | PerC family transcriptional regulator | |||
| 6515 | 92 aa hypothetical protein | |||
| 6520 | M | M.Lsp2021ORF20390P (100% identity) | M.Eco36C05ORF6520P | |
| 6525 | TrmB family transcriptional regulator | |||
| 7455 | replication endonuclease | |||
| 7460 | M | M.Eco23C14ORF22515P (100% identity) | GATC | M.Eco36C05ORF7460P |
| 7465 | TraR/DksA family transcriptional regulator | |||
| 9300 | DUF1317 family protein | |||
| 9305 | M | M.EfeC13ORF14690P (100% identity) | M.Eco36C05ORF9305P | |
| 9310 | cell division protein ZapA | |||
| 12430 | HNH endonuclease | |||
| 12435 | R | SflFF71ORF17385P (100% identity) | Eco36C05ORF12435P | |
| 12440 | AAA family ATPase | |||
| 12550 | Polarity suppression protein | |||
| 12555 | M | M.EcoZ1836ORF24740P (100% identity) | RGGNCCY | M.Eco36C05ORF12555P |
| 12560 | R | EcoZ1836ORF24740P (100% identity) | RGGNCCY | Eco36C05ORF12555P |
| 12565 | C | C.EcoZ1836ORF24740P (100% identity) | CTAAGNNNNNCTTAG | C.Eco36C05ORF12555P |
| 12570 | integrase arm-type DNA-binding domain-containing | |||
| 17230 | cell division protein DamX | |||
| 17235 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco36C05DamP |
| 17240 | ribulose-phosphate 3-epimerase | |||
| 17785 | DUF2556 family protein | |||
| 17790 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco36C05ORF17790P |
| 17795 | DNA-binding transcriptional regulator Fis | |||
| plasmid pRHB36-C05_2 | ||||
| 23985 | 73 aa hypothetical protein | |||
| 23990 | M | M.Eco4C08ORF23545P (100% identity) | M.Eco36C05ORF23990P | |
| 23995 | 103 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5265 | isocitrate dehydrogenase | |||
| 5270 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco36C05ORF5270P |
| 5275 | site-specific DNA recombinase | |||
| 12435 | HNH endonuclease | |||
| 12440 | R | SflN101McrBP (100% identity) | Eco36C05McrBP | |
| 12445 | R | SflFF71McrCP (100% identity) | Eco36C05McrCP | |
| 12450 | 128 aa hypothetical protein | |||