Escherichia coli RHB36-C07 |
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Putative Escherichia coli RHB36-C07 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 5,012,032 bp | CP057133 |
| plasmid pRHB36-C07_2: | 136,933 bp | CP057134 |
| plasmid pRHB36-C07_3: | 100,897 bp | CP057135 |
REBASE acronym: Eco36C07
Org_num: 43151
All begin HVZ47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2325 | toll/interleukin-1 receptor domain-containing | |||
| 2330 | M | M1.SspPIBORF19375P (99% identity) | M1.Eco36C07ORF2330P | |
| 2335 | M | M2.Eco592ORFBP (99% identity) | M2.Eco36C07ORF2330P | |
| 2340 | S | S.EcoSCU105ORF21520P (100% identity) | S.Eco36C07ORF2330P | |
| 2345 | R | EcoTCM3e1ORF20315P (100% identity) | Eco36C07ORF2330P | |
| 2350 | N-6 DNA methylase | |||
| 2540 | 237 aa hypothetical protein | |||
| 2545 | R | EcoSCU105ORF21300P (100% identity) | Eco36C07ORF2555P | |
| 2550 | S | S.Ecos135ORF4680P (100% identity) | S.Eco36C07ORF2555P | |
| 2555 | M | M.Ecos135ORF4680P (99% identity) | M.Eco36C07ORF2555P | |
| 2560 | DUF262 domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 10 | replication endonuclease | |||
| 15 | M | M.SenS1905ORF15P (100% identity) | M.Eco36C07ORF15P | |
| 20 | R | Eco4136ORFDP (100% identity) | Eco36C07ORF15P | |
| 25 | DUF262 domain-containing protein | |||
| 975 | PerC family transcriptional regulator | |||
| 980 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco36C07ORF980P |
| 985 | LexA family transcriptional regulator | |||
| 1015 | 67 aa hypothetical protein | |||
| 1020 | M | M.Sso63633ORF22290P (100% identity) | M.Eco36C07ORF1020P | |
| 1025 | phage lysis protein EssD | |||
| 6825 | recombination protein NinB | |||
| 6830 | M | M.EcoH66ORFCP (96% identity) | GATC | M.Eco36C07ORF6830P |
| 6835 | NinE family protein | |||
| 8875 | TrmB family transcriptional regulator | |||
| 8880 | M | M.Eco83915ORF245P (98% identity) | M.Eco36C07ORF8880P | |
| 8885 | phage lysis protein EssD | |||
| 9785 | TrmB family transcriptional regulator | |||
| 9790 | M | M.Eco83915ORF187P (100% identity) | M.Eco36C07ORF9790P | |
| 9805 | holin | |||
| 13760 | drug/metabolite exporter YedA | |||
| 13765 | V | V.Ecostr9DcmP (74% identity) | V.Eco36C07DcmP | |
| 13770 | M | M.EcoSCU105DcmP (100% identity) | CCWGG | M.Eco36C07DcmP |
| 13775 | phosphohydrolase | |||
| 14385 | transcription factor | |||
| 14390 | R | Ssp28760ORF14350P (100% identity) | RCSRC | Eco36C07ORF14390P |
| 14395 | helix-turn-helix domain-containing protein | |||
| 20535 | DNA-binding transcriptional regulator Fis | |||
| 20540 | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.Eco36C07ORF20540P |
| 20545 | DUF2556 family protein | |||
| 21065 | ribulose-phosphate 3-epimerase | |||
| 21070 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco36C07DamP |
| 21075 | cell division protein DamX | |||
| plasmid pRHB36-C07_2 | ||||
| 24245 | 102 aa hypothetical protein | |||
| 24250 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.Eco36C07ORF24250P |
| 24255 | 73 aa hypothetical protein | |||
| 24365 | relaxase/mobilization nuclease domain-containing | |||
| 24370 | RM | EcoFF58ORF23850P (99% identity) | Eco36C07ORF24370P | |
| ??? | S | S.EcoFF58ORF23850P (100% identity) | S.Eco36C07ORF24370P | |
| 24385 | conjugal transfer protein TrbC | |||
| plasmid pRHB36-C07_3 | ||||
| 24935 | 97 aa hypothetical protein | |||
| 24940 | M | M.Eal7ORF25780P (99% identity) | M.Eco36C07ORF24940P | |
| 24945 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2315 | ATP-binding protein | |||
| 2320 | R | Eco14516MrrP (100% identity) | Eco36C07Mrr2P | |
| 2325 | toll/interleukin-1 receptor domain-containing | |||
| 2555 | SAM-dependent DNA methyltransferase | |||
| 2560 | R | EcoTHYM1GmrSDP (100% identity) | Eco36C07GmrDP | |
| 2565 | cell filamentation protein Fic | |||