Escherichia fergusonii RHB38-C01 |
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Putative Escherichia fergusonii RHB38-C01 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,737,856 bp | CP057104 |
| plasmid pRHB38-C01_2: | 97,856 bp | CP057105 |
REBASE acronym: Efe38C01
Org_num: 43219
All begin HVZ66_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7945 | IS5-like element ISKpn26 family transposase | |||
| 7950 | R | Eco869RtORF22560P (99% identity) | Efe38C01ORF7960P | |
| 7955 | S | S.Eco8196I (97% identity) | S.Efe38C01ORF7960P | |
| 7960 | M | M.EcoEA7ORF3705P (99% identity) | M.Efe38C01ORF7960P | |
| 7965 | GTPase family protein | |||
| 16830 | GTPase family protein | |||
| 16835 | M | M.Efe65411ORF17490P (100% identity) | M.Efe38C01ORF16835P | |
| 16840 | S | S.Efe65411ORF17490P (100% identity) | S.Efe38C01ORF16835P | |
| 16845 | R | EfeC23ORF13600P (100% identity) | Efe38C01ORF16835P | |
| 16850 | IS1 family transposase | |||
| 18805 | Fic family protein | |||
| 18810 | R | EfeTORF35550P (100% identity) | Efe38C01ORF18815P | |
| 18815 | M | M.EfeEF02ORF206830P (99% identity) | M.Efe38C01ORF18815P | |
| 18820 | S | S.EfeEF02ORF206830P (99% identity) | S.Efe38C01ORF18815P | |
| 18825 | endoribonuclease SymE | |||
| 18905 | DUF4942 domain-containing protein | |||
| 18910 | M | M.EfeC23ORF13600P (99% identity) | M.Efe38C01ORF18910P | |
| 18915 | S | S.EcoLR641ORF45460P (67% identity) | S.Efe38C01ORF18910P | |
| 18920 | R | Ecost64ORF20060P (99% identity) | Efe38C01ORF18910P | |
| 18930 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 705 | bifunctional isocitrate dehydrogenase | |||
| 710 | M | M.EfeC10ORF1445P (99% identity) | M.Efe38C01ORF710P | |
| 715 | glyoxylate bypass operon transcriptional | |||
| 1010 | PerC family transcriptional regulator | |||
| 1015 | M | M.Sso90ORF15820P (99% identity) | GATC | M.Efe38C01ORF1015P |
| 1020 | LexA family transcriptional regulator | |||
| 1050 | 67 aa hypothetical protein | |||
| 1055 | M | M.EcosEC27ORF19465P (100% identity) | M.Efe38C01ORF1055P | |
| 1060 | phage lysis protein EssD | |||
| 5960 | DUF1382 family protein | |||
| 5965 | M | M.EcoZ151ORF6750P (99% identity) | M.Efe38C01ORF5965P | |
| 5970 | PerC family transcriptional regulator | |||
| 11300 | 69 aa hypothetical protein | |||
| 11305 | M | M.Sma1051ORF2197P (59% identity) | M.Efe38C01ORF11305P | |
| 11310 | 53 aa hypothetical protein | |||
| 14140 | DUF1317 family protein | |||
| 14145 | M | M.EfeORF2729P (100% identity) | M.Efe38C01ORF14145P | |
| 14150 | 93 aa hypothetical protein | |||
| 18885 | HNH endonuclease | |||
| 18890 | R | Efe42C24ORF17920P (98% identity) | Efe38C01ORF18890P | |
| 18895 | McrC family protein | |||
| 19560 | DNA-binding transcriptional regulator Fis | |||
| 19565 | M | M.EfeTORF37040P (100% identity) | M.Efe38C01ORF19565P | |
| 19570 | DUF2556 family protein | |||
| 20085 | ribulose-phosphate 3-epimerase | |||
| 20090 | M | M.EfeTDamP (100% identity) | M.Efe38C01DamP | |
| 20095 | cell division protein DamX | |||
| plasmid pRHB38-C01_2 | ||||
| 23200 | SPFH/Band 7/PHB domain protein | |||
| 23210 | M | M.Eco655RtORF24550P (91% identity) | M.Efe38C01ORF23210P | |
| 23215 | 62 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 18825 | endoribonuclease SymE | |||
| 18830 | R | EfeTMcrBP (100% identity) | Efe38C01McrBP | |
| 18835 | R | Eco47SOC08McrCP (100% identity) | Efe38C01McrCP | |
| 18890 | HNH endonuclease | |||
| 18895 | R | EcoS6995McrCP (99% identity) | Efe38C01McrC2P | |
| 18900 | McrB family protein | |||
| 18895 | McrC family protein | |||
| 18900 | R | EcoS6995McrBP (99% identity) | Efe38C01McrB2P | |
| 18905 | DUF4942 domain-containing protein | |||