Escherichia fergusonii RHB38-C04 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia fergusonii RHB38-C04 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,612,513 bp
GenBank #: CP057101
REBASE acronym: Efe38C04
Org_num: 43220
All begin HVZ67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18655 | Fic family protein | |||
| 18660 | R | EfeEF02ORF206830P (100% identity) | Efe38C04ORF18665P | |
| 18665 | M | M.EfeEF02ORF206830P (100% identity) | M.Efe38C04ORF18665P | |
| 18670 | S | S.EfeEF02ORF206830P (100% identity) | S.Efe38C04ORF18665P | |
| 18675 | endoribonuclease SymE | |||
| 18755 | DUF4942 domain-containing protein | |||
| 18760 | M | M.EfeEF02ORF206740P (100% identity) | M.Efe38C04ORF18760P | |
| 18765 | S | S.Efe42C24ORF17940P (100% identity) | S.Efe38C04ORF18760P | |
| 18770 | R | EfeEF02ORF206740P (100% identity) | Efe38C04ORF18760P | |
| 18780 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1240 | bifunctional isocitrate dehydrogenase | |||
| 1245 | M | M.EfeC18ORF680P (100% identity) | M.Efe38C04ORF1245P | |
| 1250 | glyoxylate bypass operon transcriptional | |||
| 2955 | PerC family transcriptional regulator | |||
| 2960 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Efe38C04ORF2960P |
| 2965 | LexA family transcriptional regulator | |||
| 7100 | flagella biosynthesis regulator Flk | |||
| 7105 | M | M.Efe65411ORF7205P (100% identity) | M.Efe38C04ORF7105P | |
| 7110 | Com family DNA-binding transcriptional | |||
| 8110 | TraR/DksA family transcriptional regulator | |||
| 8115 | M | M.SspS13ORF8710P (99% identity) | GATC | M.Efe38C04ORF8115P |
| 8120 | replication endonuclease | |||
| 16780 | 158 aa hypothetical protein | |||
| 16785 | R | Sso8033ORF3755P (100% identity) | Efe38C04ORF16790P | |
| 16790 | M | M.SflSTLE1ORF5615P (100% identity) | M.Efe38C04ORF16790P | |
| 16795 | 257 aa hypothetical protein | |||
| 18735 | HNH endonuclease | |||
| 18740 | R | Efe42C24ORF17920P (100% identity) | Efe38C04ORF18740P | |
| 18745 | McrC family protein | |||
| 19415 | DNA-binding transcriptional regulator Fis | |||
| 19420 | M | M.EfeTORF37040P (100% identity) | M.Efe38C04ORF19420P | |
| 19425 | DUF2556 family protein | |||
| 19940 | ribulose-phosphate 3-epimerase | |||
| 19945 | M | M.EfeTDamP (100% identity) | M.Efe38C04DamP | |
| 19950 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18675 | endoribonuclease SymE | |||
| 18680 | R | EfeTMcrBP (100% identity) | Efe38C04McrB2P | |
| 18685 | R | EfeMcrCP (100% identity) | Efe38C04McrC2P | |
| 18740 | HNH endonuclease | |||
| 18745 | R | EfeEF02McrC2P (100% identity) | Efe38C04McrCP | |
| 18750 | R | EfeEF02McrB2P (100% identity) | Efe38C04McrBP | |
| 18755 | DUF4942 domain-containing protein | |||