Escherichia coli RHB39-C23 |
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Putative Escherichia coli RHB39-C23 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
Complete sequence: 4,823,091 bp
GenBank #: CP057038
REBASE acronym: Eco39C23
Org_num: 43170
All begin HVZ89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 11350 | 128 aa hypothetical protein | |||
| 11355 | M | M.EcohubtORF19935P (100% identity) | TGANNNNNNTCCA | M.Eco39C23ORF11355P |
| 11360 | S | S.SflN101ORF11895P (100% identity) | TGANNNNNNTCCA | S.Eco39C23ORF11355P |
| 11365 | 428 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 725 | phosphohydrolase | |||
| 730 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco39C23DcmP |
| 735 | V | V.SsoSE61DcmP (100% identity) | V.Eco39C23DcmP | |
| 740 | drug/metabolite exporter YedA | |||
| 6510 | replication endonuclease | |||
| 6515 | M | M.EcoVA1ORFFP (100% identity) | GATC | M.Eco39C23ORF6515P |
| 6520 | TraR/DksA family transcriptional regulator | |||
| 11330 | HNH endonuclease | |||
| 11335 | R | EcohubtORF19915P (100% identity) | Eco39C23ORF11335P | |
| 11340 | AAA family ATPase | |||
| 11500 | BREX-1 system phosphatase PglZ type A | |||
| 11505 | RM | EcoSCU112ORF20670P (100% identity) | Eco39C23ORF11505P | |
| 11510 | BREX system P-loop protein BrxC | |||
| 16185 | cell division protein DamX | |||
| 16190 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco39C23DamP |
| 16195 | ribulose-phosphate 3-epimerase | |||
| 16740 | DUF2556 family protein | |||
| 16745 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco39C23ORF16745P |
| 16750 | DNA-binding transcriptional regulator Fis | |||
| 20095 | tyrosine-type recombinase/integrase | |||
| 20100 | M | M.SenRM006ORF5335P (100% identity) | M.Eco39C23ORF20100P | |
| 20105 | AAA family ATPase | |||
| 20165 | PerC family transcriptional regulator | |||
| 20170 | M | M.Efe41C20ORF1660P (100% identity) | GATC | M.Eco39C23ORF20170P |
| 20175 | LexA family transcriptional regulator | |||
| 20370 | 257 aa hypothetical protein | |||
| 20375 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco39C23ORF20375P | |
| 20380 | R | Sso8033ORF3755P (100% identity) | Eco39C23ORF20375P | |
| 20385 | 121 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 11335 | HNH endonuclease | |||
| 11340 | R | SflN101McrBP (100% identity) | Eco39C23McrBP | |
| 11345 | R | EcohubtMcrCP (100% identity) | Eco39C23McrCP | |
| 11350 | 128 aa hypothetical protein | |||