Escherichia coli RHB41-C11 |
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Putative Escherichia coli RHB41-C11 RM systems
Ref: Shaw,L.P. unpublished
REBASE ref # 28537
| Sequence length: | GenBank #: | |
| Chromosome: | 4,982,597 bp | CP056985 |
| plasmid pRHB41-C11_2: | 211,919 bp | CP056986 |
REBASE acronym: Eco41C11
Org_num: 43186
All begin HV007_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9925 | 388 aa hypothetical protein | |||
| 9930 | M | M.EcoC1730ORF9820P (100% identity) | M.Eco41C11ORF9930P | |
| 9935 | S | S1.EcoC1730ORF9820P (100% identity) | S.Eco41C11ORF9930P | |
| 9940 | YecA family protein | |||
| 9945 | R | EcoC1730ORF9820P (100% identity) | Eco41C11ORF9930P | |
| 9950 | M48 family metallopeptidase | |||
| 21415 | IS3-like element IS3 family transposase | |||
| 21420 | S | S.EcoYPE3ORF20380P (64% identity) | S.Eco41C11ORF21420P | |
| 21425 | R | EcoYPE3ORF20380P (100% identity) | Eco41C11ORF21420P | |
| 21435 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1740 | cell division protein DamX | |||
| 1745 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco41C11DamP |
| 1750 | ribulose-phosphate 3-epimerase | |||
| 2385 | DUF2556 family protein | |||
| 2390 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.Eco41C11ORF2390P |
| 2395 | DNA-binding transcriptional regulator Fis | |||
| 5380 | transposase | |||
| 5385 | RM | SflLIN17ORF3140P (100% identity) | Eco41C11ORF5385P | |
| 5390 | DEAD/DEAH box helicase | |||
| 5610 | PerC family transcriptional regulator | |||
| 5615 | M | M.EcoT761ORF20590P (100% identity) | GATC | M.Eco41C11ORF5615P |
| 5620 | LexA family transcriptional regulator | |||
| 5650 | ISL3 family transposase | |||
| 5655 | M | M.EcoED31ORF12645P (95% identity) | M.Eco41C11ORF5655P | |
| 5660 | phage holin, lambda family | |||
| 5830 | 257 aa hypothetical protein | |||
| 5835 | M | M.SflSTLE1ORF5615P (100% identity) | M.Eco41C11ORF5835P | |
| 5840 | R | EcoTIF10ORFCP (100% identity) | Eco41C11ORF5835P | |
| 5845 | toprim domain-containing protein | |||
| 6245 | Com family DNA-binding transcriptional | |||
| 6250 | M | M.EcoEC180ORF6030P (100% identity) | M.Eco41C11ORF6250P | |
| 6255 | ribosome-associated translation inhibitor RaiA | |||
| 9595 | phosphohydrolase | |||
| 9600 | M | M.EcoC1730DcmP (100% identity) | CCWGG | M.Eco41C11DcmP |
| 9605 | V | V.SsoSE61DcmP (100% identity) | V.Eco41C11DcmP | |
| 9610 | drug/metabolite exporter YedA | |||
| 14075 | Shiga toxin Stx2e subunit A | |||
| 14095 | M | M.EcoC1730ORF14040P (100% identity) | M.Eco41C11ORF14095P | |
| 14100 | TrmB family transcriptional regulator | |||
| 16480 | replication endonuclease | |||
| 16485 | M | M.SspS13ORF8710P (100% identity) | GATC | M.Eco41C11ORF16485P |
| 16490 | TraR/DksA family transcriptional regulator | |||
| 19280 | tellurite resistance TerB family protein | |||
| 19295 | M | M.EcoE1728ORF16650P (100% identity) | M.Eco41C11ORF19295P | |
| 19300 | TrmB family transcriptional regulator | |||
| 20940 | phage lysis protein EssD | |||
| 20945 | M | M.Sso63633ORF22290P (100% identity) | M.Eco41C11ORF20945P | |
| 20950 | 67 aa hypothetical protein | |||
| plasmid pRHB41-C11_2 | ||||
| 25135 | 55 aa hypothetical protein | |||
| 25140 | M | M.YpsF1ORFCP (100% identity) | M.Eco41C11ORF25140P | |
| 25145 | thermonuclease family protein | |||
| 25325 | DNA-binding protein | |||
| 25330 | M | M.YpsF1ORFDP (100% identity) | M.Eco41C11ORF25330P | |
| 25335 | 284 aa hypothetical protein | |||